Five unique traits of effective computational biologist
...n. Learn to perform root cause analysis, learn enough about the underlying system to look for other clues and solutions, and learn to take a long distance view of an issue before deep...3940 days ago
Tools to detect synteny blocks regions among multiple genomes
...Cinteny server can be used for finding regions syntenic across multiple genomes and measuring the extent of genome rearrangement using reversal distance as a measure. OrthoCluster (...2600 days ago
Computer simulation of genetic mechanism !!
...l http://l.web.umkc.edu/liujian/ IBDsim IBDSim is a computer package for the simulation of genotypic data under general isolation by distance models. http://raphael.lebloi...2965 days ago
BBTools for bioinformatician !
...mple, hdist=2 qhdist=1 and 3 Ns in the reference would allow a hamming distance of 6 with much lower resource...ontaminants (substrings) to be removed, and a variable hamming or edit distance to be specified. Usage: Co...2260 days ago
Levenshtein and Damerau-Levenshtein distance !
Levenshtein Distance Also known as Edit Distance, it is the number of transformations (delet...;c”, which will give us a Levenshtein Distance of 2.Edit Distance is very ea...eworks also support the Damerau-Levenshtein distance: Damerau-Levenshtein...940 days ago
Useful Bioinformatics Analysis Tools !
...3; 14():Article no. 160, Kmer-db Tool for estimation of evolutionary distances in a collection of genomes....Dlugosz, M., Kokot, M., Danek, A., Kmer-db: instant evolutionary distance estimation, Bioinformati...853 days ago