List of bioinformatics open source projects/software.
Open source software is software that can be freely used, changed, and shared (in modified or unmodified form) by a...genetic workflows AutoDock http://autodock.scripps.edu/ suite of automated docking t...3746 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
List of generic simulation software/tools/resource with brief description and homepag...ntially under selection in a structured population http://www2.unil.ch/popgen/softwares/quantinemo/RECOAL Simulates n...3727 days ago
List of In-silico Binding Site Prediction Tools
Following are the list of In-silico Binding Site Prediction in Proteins to...ng sites for knowledge-based protein docking. KBDOCK integrates protein do...ose structural templates for protein docking. [More] Pocketome: http://ww...pplications such as automated ligand docking o...3733 days ago
Commercial and public next-gen-seq (NGS) software
Integrated solutions CLCbio Genomics Workbench - de novo and reference assembly of Sa...mina has a software list: http://www.illumina.com/pagesnrn.ilmn?ID=245. Some softwares in his blog (http://www.fejes...3508 days ago
Binding Site Prediction in Protein !
The interaction between proteins and other molecules is fundamental to all biological functions. In this section we...structure of the intermolecular complex formed between two or more molecules (docking)....2192 days ago
Genome Assembly Tools and Software - PART1 !!
The genome assemblers generally take a file of short sequence reads and a file of quality-value as the input. Since the quality-value file for the high throughput short...2675 days ago
Awesome perl frameworks, libraries and software - PART 1
A curated list of awesome Perl frameworks, libraries and software. major/MySQLTune...entation For Perl centreon/centreon-plugins - Collection of plugins for softwares compatible with Nagios plugin...2479 days ago
Protein-Protein Interaction Sites Predictions !
The study of Protein–Protein Interactions (PPIs) has a crucial role in biology, medicine and the pharmaceutic... Promate ODA Identification of optimal surface patches with the lowest docking d...2192 days ago
Ligand Docking Tools and Software !
Ligand docking referred to cases where small molecule (“ligand&rdquo..."). The following is partial list of docking software, focusing on free (a...academic institutes) and/or popular docking tools. AutoDock Stoch...e shown that the performance of most docking t...2192 days ago
Tools for Protein-Protein Docking !
Predicting the structure of protein–protein complexes using docking approaches is a difficult proble...surface representation for soft docking Shape complementarity and Le...surface representation for soft docking Shape complementarity and Le...ibility in protein–protein docking i...2192 days ago