Bioinformatics Courses Around the World
...D Program in Computational Biology (Newark, New Jersey) Sequence Alignment and Modeling System (Documentation for SAM) Technical Universit...3905 days ago
Useful Links for Bioinformaticians
...als.shtml dmoz.org/Computers/Programming/Languages/C/Tutorials/ CGI Tutorial www.htmlgoodies.com/beyond/cgi.html www.cgi-resources.com/Documentation/CGI_Tutorials/ www.gustavo.n...3093 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...s describing the use of R and Bioconductor for analysis of genomic datasets, available at R and Bioconductor Manuals. Manuals and contributed documentation for R are available at the R-...3742 days ago
Next generation sequencing in R or bioconductor environment
...s, ShortRead, Rsamtools, etc. Documentation GenomicRanges Overview...ormation and annotation data. Documentation Motif Discovery cos...e variety of alignment tools. Documentation Samtools Website BWA (Burrow..., multtest and stat packages. Documentation Additional ChIP-Seq Packages...3587 days ago
Tool: Gene Set Clustering based on Functional annotation (GeneSCF)
..., it has been successfully tested on Ubuntu, Mint and Cent OS. Other distributions of Linux might work as well. Documentation:http://genescf.kandurilab.org/documentation.php Report issues on...2834 days ago
Genome Assembly Tools and Software - PART1 !!
...mbler) into longer contigs, by iteratively calling Vmatch and Trinity, until some stop criteria are met. Currently, TriMetAss lacks a thorough documentation, but you can direct questions...2648 days ago
Source Code and Pseudo Code !!
...do cite variables that are initialized as part of their declarations. E.g. "initialize count to zero" is a good entry.Function Calls, Function Documentation, and Pseudocode Calls to Fun...2621 days ago
Awesome perl frameworks, libraries and software - PART 1
... - A pure-perl process management system Ovid/DB--Color - Syntax highlighting the Perl debugger jpa/Moose-Doc-JA - Perl Moose Documentation In Japanese hakobe/Guita&nbs...2451 days ago
2451 days ago
Python learning resources for bioinformatics and computational biologist !
...ogramming Computer Vision with Python (PDF) Python 2 Official Documentation (PDF, HTML, TEXT) (2.x)...2.7 quick reference - New Mexico Tech (2.7) Python 3 Official Documentation (PDF, EPUB, HTML, TEXT)...2217 days ago