Results for "environment"

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  • sockeye

    ...e results of these comparative analyses are also displayed in the 3D environment of Sockeye. By using the Java3D API to visualize genomic data in a 3D environment, we are able to compactly dis...

    340 days ago

  • Progressive Cactus

    ...git gcc 4.2 or newer python 2.7 wget 64bit processor and build environment 150GB+ of memory on at least...to add the location of progressiveCactus/bin to your PATH environment variable. In order to run the...

    371 days ago

  • ShRec3D

    ...ncbi.nlm.nih.gov/pubmed/19815776). There are two options to run ShRec3D (on linuX only so far): the first one uses the Matlab complier runtime environment (MCR), the second one doesn't...

    1124 days ago

  • Mobyle: a new full web bioinformatics framework

    Mobyle, to provide a flexible and usable Web environment for defining and running bioinformatics analyses. It embeds simple yet powerful data management features that allow the user to...

    15 days ago

  • Perlbrew: admin-free perl installation management tool.

    ...nit needs to be executed. The default perlbrew root directory is ~/perl5/perlbrew, which can be changed by setting PERLBREW_ROOTenvironment variable before the installat...

    195 days ago

  • NCBI Prokaryotic Genome Annotation Pipeline

    ...hapter. NCBI's annotation pipeline depends on several internal databases and is not currently available for download or use outside of the NCBI environment. https://www.ncbi.nlm.nih.go...

    252 days ago

  • HOMER: Software for motif discovery and next-gen sequencing analysis

    ...nts knowledge which is important to know before diving head first into more advanced analysis tools such as HOMER. Setting up your computing environment Retrieving and storing seque...

    637 days ago

  • NearHGT

    ...vel, self-contained technique named Near HGT, based on the synteny index, to measure the divergence of a gene from its native genomic environment and used it to identify candi...

    580 days ago