List of bioinformatics open source projects/software.
...bioinformatics software suite for the analysis of functional genomics experiments, e.g. RNA-seq or ChIP-seq....ed for promoter pattern generation and promoter analysis. MeV: Multi-Experiment Viewer http://www.tm4.org/me...3747 days ago
Next generation sequencing in R or bioconductor environment
...s from high-throughput ChIP-chip or ChIP-seq experiments, but it can be applied to an...ng DNA binding sites of proteins in ChIP-Seq experiments. Its algorithm uses hidden M...Splice Junctions Another utility of RNA-Seq experiments is the analysis of splice ju...3615 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...ine program Input: FASTQ Reference files: FASTA Output: “For each possible pair of read file, reference genome and mapping algorithm an experiment directory will be created in...2899 days ago