Results for "fast"
Top-level pages
...genome sequencing cost and desire to explore and understand biological machanism at genomic level, speed up the genomic sequencing projects. In the fast growing HT-NGS technologies,...3938 days ago
- ...rkov Modeler) uses interpolated Markov models (IMMs) to identify the coding regions and distinguish them from noncoding DN Glimmer HMM A fast and accurate gene finder base...
3932 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...Full Text Compression of DNA sequence reads in FASTQ format. Deorowicz & Grab...wski, Bioinformatics 27(6):860-2, 2011. PubMed Fast and accurate short read align...-index of the 1.2 billion reads] Readjoiner: a fast and memory efficient string g...3770 days ago
Bioinformatics infrastructure speed up Indian agriculture
...cted make much better sense out of huge genomic" - http://www.biospectrumindia.com/biospecindia/features/203849/supercomputing-indian-agriculture-fast-track-mode/page/13699 days ago
List of In-silico Binding Site Prediction Tools
...t. PDBeMotif: http://www.ebi.ac.uk/pdbe-site/pdbemotif/ is an extremely fast and powerful search tool that...ownload tab. fpocket: http://fpocket.sourceforge.net/ fpocket is a very fast open source protein pocket (c...3734 days ago
Next generation sequencing in R or bioconductor environment
...e management and analysis in R. It contains many speed and memory effective string containers, string matching algorithms, and other utilities, for fast manipulation of large sets of...3615 days ago
Commercial and public next-gen-seq (NGS) software
...owing programs: SWIFT — fast local alignment search, guara...n College. Win/Linux/MacOSX MrFAST and MrsFAST - mrFAST & mr...gonucleotides in color space)BFAST https://secure.genome.ucla.ed...versity. TopHat - TopHat is a fast splice junction mapper for RN...3509 days ago
Apps for Busy Bioinformatics Researchers !!!
...ols such as "Reverse Complement", "Jump to", "Copy and Paste sequences", fast and end scrolling, "Chromatog...- ab1. It includes handy tools such as "Reverse Complement", "Jump to", fast and end scrolling, "Chromatog...3531 days ago
Software packages for next gen sequence analysis
...Align/Assemble to a reference * BFAST - Blat-like Fast Accurate Search Tool. Written...on College. Win/Linux/MacOSX * MrFAST and MrsFAST - mrFAST & mr...uit is a software collection for fast index-based sequence comparis...iversity. * TopHat - TopHat is a fast splice junction mapper for RN...3233 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...can import the sample data in FASTA, FASTQ or tag-count format. In addi...ds) Input: raw NGS datasets; fasta, fastq, gzipped or not; no...Input: BAM Reference Genome: FASTA indexed with SAMtools faidx...ith homology modeling Input: FASTA protein sequence, or accessi...2899 days ago
