Results for "flexible"
Blogs
Computer simulation of genetic mechanism !!
...specialization of the program GenomePop just to manage SNPs under more flexible and useful settings. If you n...bioinfolab.unl.edu/~cstrope/isg/ Indelible A powerful and flexible simulator of biological evolu...2964 days ago
- ...nd thus, works on phylogenetic trees even where branch lengths are not provided. GapAdj: Gapped Adjacencies A synteny-based method that is flexible enough to handle a model of e...
2519 days ago
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Bookmarks
- You are requested to please bookmark collection of bioinformatics tools, scripts, codes that can be pieced together in a very easy and flexible manner to perform both simple and comple...
3223 days ago
Trimmomatic: A flexible read trimming tool for Illumina NGS data
Paired End: java -jar trimmomatic-0.35.jar PE -phred33 input_forward.fq.gz input_reverse.fq.gz output_forward_paired.fq.gz output_forward_unpaired.fq.gz output_reverse_...2931 days ago
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Pages
Linux Sort Commands for Bioinformatics
Almost all the scripting languages such as Perl, Python etc have built-in sort, but unfortunately none of them are as flexible as sort command. But one when it come to space efficiency...3616 days ago
Awesome perl frameworks, libraries and software - PART 2
...implementation of the HTTP/2.0 protocol slimakuj/perl - Materiały do warsztatów z Perla reyjrar/Parse-Syslog-Line - Flexible library for parsing syslog me...2483 days ago
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Top-level pages
- ...7) Gapped BLAST and PSI–BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25:3389–3402Pearson WR (2000) Flexible sequence similarity searching...
3936 days ago
Useful Links for Bioinformaticians
...cular Sequence Analysis Exploring Distant Protein Sequence Relationships Sequence Analysis tutorial The Sequence and Structure Searching Site Flexible Information Visualization of...3119 days ago
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Wire posts
News
Update Genome Workbench 2.7.15 released
...e data. Genome Workbench was developed entirely in-house at NCBI and makes use of the NCBI C++ ToolKit. The C++ ToolKit provides a convenient and flexible cross-platform API for managi...3710 days ago
- ...art TransplantDavid Geffen School of Medicine at UCLARonald Reagan UCLA Medical Center Abstract: Strand NGS supports a comprehensive and flexible RNA-Seq data analysis workflo...
2472 days ago
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Opportunity posts
NIT Calicut Faculty Jobs 2013 in Bioinformatics
...basis will not be treated as regular staff till they are regularized, subject to the conditions stated earlier. The Institute has adopted 4-tier flexible faculty structure recommended...3835 days ago
China University of Macau PhD Position 2015 in Bioinformatics, Computer Science
...ll work on a research project focusing on the flexible receptor protein-ligand docki...and scoring functions for large-scale, highly flexible protein-ligand docking proble...to work on a research project focusing on the flexible receptor protein-ligand docki...3411 days ago
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Bio-Scripts
Install SibeliaZ in your Linux cluster !
...ioconda sibeliaz Collecting package metadata (current_repodata.json): done Solving environment: failed with initial frozen solve. Retrying with flexible solve. Solving environment:...1221 days ago
- ...bioconda kraken2 Collecting package metadata (current_repodata.json): done Solving environment: failed with initial frozen solve. Retrying with flexible solve. Solving environment:...
1204 days ago
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Tryst
Tryst with a Bioinformatician # Dr Altan Kara
...egrated manner and besides lots of the packages it provides, it is open source and also open for development. As a result, it provides strong and flexible ways to do science. In b...2351 days ago
Tags
DFAST: a flexible prokaryotic genome annotation pipeline for faster genome publication
We developed a prokaryotic genome annotation pipeline, DFAST, that also supports genome submission to public sequence databases. DFAST was originally started as an on-line annotation server, and to date, over 7,000 jobs have been processed since its first launch in 2016. Here, we present a newly ...Tags: DFAST, flexible, prokaryotic, genome, annotation, pipeline, faster, genome, publication
2353 days ago
gSearch: a fast and flexible general search tool for whole-genome sequencing
gSearch compares sequence variants in the Genome Variation Format (GVF) or Variant Call Format (VCF) with a pre-compiled annotation or with variants in other genomes. Its search algorithms are subsequently optimized and implemented in a multi-threaded manner.Tags: gSearch, fast, flexible, search, tool, whole-genome, sequencing
2088 days ago
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Comments
Comment on "Which of the following programming language is best for a bioinformatics beginner?"
...f Perl with the BioPerl is simply a joy to use. I would recommend every budding bioinformatician to try it out for yourself. Why Perl? Flexible, with a global repository (CP...3520 days ago
