Results for "framework"

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  • Next Generation Sequencing (NGS) Tutorials

    ...tr441 ngs_backbone: a pipeline for read cleaning, mapping and SNP calling using Next Generation Sequence  10.1186/1471-2164-12-285 A framework for variation discovery and g...

    3472 days ago

  • Orione – a web-based framework for NGS analysis in microbiology

    ...ions researchers at CRS4, Italy have developed Orione, a Galaxy-based framework consisting of publicly availa...Travaglione A, Uva P, Zanetti G, Fotia G. (2014) Orione, a web-based framework for NGS analysis in microbiol...

    3559 days ago

  • Orange-Bioinformatics 2.5.34

    ...le factors. All features can be combined with powerful visualization, network exploration and data mining techniques from the Orange data mining framework.

    3484 days ago

  • InfoGenomeR: Integrative reconstruction of cancer genome karyotypes

    InfoGenomeR is the Integrative Framework for Genome Reconstruction that uses a breakpoint graph to model the connectivity among genomic segments at the genome-wide scale. InfoGenomeR i...

    1081 days ago

  • ALE: a Generic Assembly Likelihood Evaluation Framework for Assessing the Accuracy of Genome and Metagenome Assemblies

    Assembly Likelihood Evaluation (ALE) framework that overcomes these limitations, sys...ner using rigorous statistical methods. This framework is comprehensive, and integra...variant caller, EviCons. In summary, the ALE framework provides a comprehensive, ref...

    2916 days ago

  • GAEMR

    The Genome Assembly Evaluation Metrics and Reporting (GAEMR) package is an assembly analysis framework composed a number of integrated modules. These modules c...

    2867 days ago

  • LUMPY

    A probabilistic framework for structural variant discovery. Ryan M Layer, Colby Chiang, Aaron R Quinlan, and Ira M Hall. 2014. "LUMPY: a Probabilistic Framework for Structural Variant Discov...

    2795 days ago

  • GoJS

    ...ML5 Canvas element or SVG without any server-side requirements. GoJS does not depend on any JavaScript libraries or frameworks, so it should work with any HTML or JavaScript framework or with no framework at all....

    2706 days ago

  • SpeedSeq

    A flexible framework for rapid genome analysis and interpretation C Chiang, R M Layer, G G Faust, M R Lindberg, D B Rose, E P Garrison, G T Marth, A R Quinlan, and I M Hall....

    2647 days ago

  • EasyBuild

    EasyBuild is a software build and installation framework that allows you to manage (scientific) software on High Performance Computing (HPC) systems in an efficient way.A full list of supported software packages is available here.

    2639 days ago