Results for "gatk"

Bio-Scripts

  • Downloading GATK !

    ...s://github.com/broadinstitute/gatk/releases/download/4.0.2.1/gatk-4.0.2.1.zip --2018-08-30 11:...endra@jitendra-UNLOCK-INSTALL[gatk-4.0.2.1] ./gatk --list...Compare GATK's internal pileup to a refere...e reads. MarkDuplicatesGATK (EX...

    2038 days ago

  • Bash command to install GATK, Bedtools and SnpEff !

    (my_GATK) [wsu29@bladeamd-2 tmp]$ conda install gatk Collecting package metadata...py38_0 156 KB gatk-3.8 |...:certifi-2019.11.28-py38_0 gatk bioconda/noarch...#################### | 100% gatk-3.8 | 8 KB |...

    1518 days ago

  • Install GATK 4 using conda !

    #GATK is a toolkit developed by the bro...e. First let’s download and unzip GATK from github. The creators of GATK recommend running GATK throug...create a virtual environment for GATK by using the yaml file includ...https://github.com/broadinstitute/gatk/releases/download/4.0.2.1/gat...

    774 days ago