Results for "gatk"

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  • #GATK and #Picard to filter low quality variants https://insidedna.me/tutorials/view/gatk-picard-filter-vcf-variants-snp

    Tags: GATK, Picard

    2822 days ago

  • GATK is open source https://software.broadinstitute.org/gatk/ #GATK #Broad

    Tags: GATK, Broad

    2005 days ago

  • Analyse your sample with GATK pipeline. https://app.terra.bio/ #GATK

    Tags: GATK

    1517 days ago

  • #Genome #Analysis #Toolkit #Variant Discovery in High-Throughput #Sequencing Data https://gatk.broadinstitute.org/hc/en-us #GATK

    Tags: Genome, Analysis, Toolkit, Variant, Sequencing, GATK

    1498 days ago

  • (grep ^"#" in.gff; grep -v ^"#" in.gff | sort -k1,1 -k4,4n) | bgzip > sorted.gff.gz; tabix -p gff sorted.gff.gz; #GATK

    Tags: GATK

    1498 days ago

  • Useful bioinformatics database for GATK analysis ftp://ftp.broadinstitute.org/bundle/hg38/ #GATK #Database

    Tags: GATK, Database

    1496 days ago

  • Best Practices for Variant Calling with the GATK

    The presentations below were filmed during the March 2015 GATK Workshop, part of the BroadE Workshop series. At the time of this workshop, the current version of Broad’s Genome Analysis Toolkit (GATK) was version 3.3. Genome Analysis Toolkit 0...

    Tags: Best, Practices, Variant, Calling, GATK

    1496 days ago