Results for "genome"

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  • Dot, an interactive viewer for genome-genome comparison

    ...interactive dot plot viewer that allows genome scientists to visualize genome-genome alignments in order to...mmonly used software method for aligning genome assemblies. A quick script ca...demand. Dot, an interactive viewer for genome-genome comparison https://dn...

    41 days ago

  • GAGE : Genome Assembly Gold-standard Evaluation

    ...s an evaluation of the very latest large-scale genome assembly algorithms. We have...n attempt to produce a realistic assessment of genome assembly software in a rapidl...of GAGE have now been published in the journal Genome Research: GAGE: A critic...

    535 days ago

  • MAKER

    MAKER is a portable and easily configurable genome annotation pipeline.Its purpose...is to allow smaller eukaryotic and prokaryotic genome projects to independently annotate their genomes and to create genome databases. MAKER identifies r...

    748 days ago

  • CLgenomics

    ...e specifically designed for bacterial genome analysis. This program has a powerful multi-genome browser, which enables rapid...nomes. To use CLgenomics, individual genome data (genome sequences + anno...icly available Bacterial and Archaeal genomes.

    358 days ago

  • Alignment of closely related whole genomes/scaffolds

    ...a dramatic increase in the number of sequenced genomes for species across the tree...tools that can quickly compare multiple whole-genome sequences, millions of base p...ave been created to report new tools for whole genome alignments. Please report ne...

    757 days ago

  • Largest Genome Sequenced

    The enormous size of the loblolly pine genome having 22 billion base pairs compared to only 3 billion in the human genome. In other words, it is s...argest and the most complete conifer genome ever sequenced. Related Pape...

    1436 days ago

  • CGView - Circular Genome Viewer

    ...isplay and navigate bacterial genomes. GView is useful for producing high-quality genome maps for use in publications.... Users can interact with the genome using a powerful pan-and-zoom...e or for application to other genome maps using GView's custom fil...

    523 days ago

  • Introduction of Epigenomics

    What is the epigenome? What does the epigenome do? What makes up the epigenome? Is the epigenome inherited? What is imprinting? Can the epigenome change? What makes the epigenome change? How do changes in the epigenome contribute to cancer? How are researchers exploring the epigenome?

    1603 days ago

  • Delta: a new Web-based 3D genome visualization and analysis platform

    ...and exploring the 3D physical architecture of genomes. Delta takes Hi-C...associating domains and chromatin loops in the genome. It then generates a physical...ization tool which enhances the integration of genome topology/physical structure w...

    66 days ago

  • GenomeComp

    GenomeComp is a tool for summarizing, parsing and visualizing the genome wide sequence comparison resu...angements, insertions or deletions of genome segments between species or s...sequences, especially closely related genomes such as inter-species or int...

    372 days ago