Results for "graphs"
Top-level pages
...field that is may not be your strong point. Excel is fine for creating graphs. If you’re serious abou...search focuses on image informatics and scalable querying and mining of graphs.For more detail visit: h...3931 days ago
- ...uts. This can solve many problems such as the maximum flow for directed graphs, notably by using the simplex...of reduction is finding the simplest transformation possible. Using graphs Many problems, such as pla...
3931 days ago
Best book Titles for Learning Bionformatics
...Methods in Enzymology Volume 303), S.M. Weissman (Editor), 1999, Academic Press Systems Biology, Genetic and Biochemical Network Handbook of Graphs and Networks : From the Genom...3902 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...et al., Bioinformatics 27(13):i137-41, 2011. PubMedCentral De novo assembly Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Zerbino & Birney, Genome...3764 days ago
A guide for complete R beginners !
...to the basics of R, focusing on a few common tasks that biologists need to perform some basic analysis: load a table, plot some graphs, and perform some basic stati...3346 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...n reads: FASTA Output: 2Kplus2 Description: algorithm searches graphs produced by de novo assembler...ssification of single nucleotide polymorphisms in transformed De Bruijn graphs using Cortex assembler.&rdquo...2893 days ago
Genome Assembly Tools and Software - PART1 !!
...ing a graph structure combining both de Bruijn graphs and protein HMMs. The inclusi...age v0.7.1 – Navigating De novo Assembly Graphs Easily Bandage is a progra...ndash; Transcript Assembly by Mapping Reads to Graphs TAG is a tool for metatran...2670 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
...mutations; algorithm uses k-mers and is based on colored de Bruijn graphs) Software (Python) http://g...uences and the distances between them based on assembly using de Bruijn graphs and Bray–Curtis dissimi...2355 days ago
List of visualization tools for network biology
...of biochemical processes http://cellpublisher.gobics.de/ Graphle Distributed network exploration and visualization of interactive large, dense graphs http://tinyurl.com/graphle/...2272 days ago
Bioinformatics tools for genome assembly !
...and multi-cell bacterial genomes, as well as small eukaryotic genomes. ABySS: A parallelized assembler for large genomes that uses de Bruijn graphs. Velvet: Another de Brui...270 days ago
