Nucl2Vec: Local alignment of DNA sequences using Distributed Vector Representation
We demonstrate a novel approach forlocal alignment of DNA reads with respect to reference genome.For this process we have used Skip-gram model for creatingencoding(Nucl2Vec...1108 days ago
Next Generation Sequencing (NGS) Tutorials
Institute of computational biomedicine, Cornell University provide an NGS workshop tu...ch/training/training-activities-schedule/archive-2013.html Variant Detection (Model organism) Advanced tutorial h...3450 days ago
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InfoGenomeR: Integrative reconstruction of cancer genome karyotypes
InfoGenomeR is the Integrative Framework for Genome Reconstruction that uses a breakpoint graph to model the connectivity among genomi...1059 days ago
Smash: An alignment-free method to find and visualise rearrangements between pairs of DNA sequences
Smash is a completely alignment-free method/tool to find and visualise genomic rearr...ction is based on conditional exclusive compression, namely using a FCM (Markov model), of high context order (typi...2893 days ago
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Many-Core Engine (MCE) for Perl example
MCE spawns a pool of workers and the...d, MCE follows a bank queuing model. Imagine the line being the d...el workers. MCE enhances that model by adding the ability to chun...process while running. MCE MODELS The models take Many-Core E...l control when utilizing this model. MCE::Flow is similar to MCE:...2613 days ago