Results for "hidden markov model"
Top-level pages
The completion of the first human genome drafts was just a start of the modern DNA sequencing...he next step after reading genetic code is writing a script to analyse and explore the hidde...3938 days ago
- ...and techniques such as the three-dimensional modeling of biomolecules and biologi...useful for building sequence profiles or Hidden Markov Models to perform more sensitive ho...e predicted with an accuracy above 70 %. 3D models can be obtained most easily...
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- ...ata mining, the extraction of hidden predictive information from l...ing. They scour databases for hidden patterns, finding predictive...mpts to find a function which models the data with the least error...d of support vector machines, hidden markov models and neural networks. But com...
3936 days ago
- An algorithm is a computable set of steps to...oblems, such as playing chess, can be modeled as problems on graphs. A gra...tm•http://bioweb.pasteur.fr/docs/modeller/node137.html•http://w...nks.html•http://www.breadfan.com/markov.html•http://cslu.cse.og...
3936 days ago
- Genomics is the study of the genomes of organisms. The field includes inten...nomes of bacteria and archaea.Glimmer (Gene Locator and Interpolated Markov Modeler) uses interpolated Markov models (IMMs) to identify the codin...
3932 days ago
Best book Titles for Learning Bionformatics
...u, Michael Zhang (Editors), 2002, MIT Press Hidden Markov Models for Bioinformatics, Timo Kos...Biological Sequence Analysis: Probabilistic Models of Proteins and Nucleic Acid...ssion: From Experiments to Data Analysis and Modeling, Pierre Baldi, G. Wesley H...3908 days ago
Hidden Markov Models, Viterbi Algorithm, Markov Chain Exploration with script
Hidden Markov Models, the Viterbi Algorithm, and CpG Islands (in VB6) Problem...anation http://www.tannerhelland.com/1187/hidden-markov-models-viterbi-algorithm-cpg-islands...ng Wiki page http://en.wikipedia.org/wiki/Hidden_Markov_model On CpG island paper and for...3815 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
Global overview papers Next generation quan...iD reads in colorspace] Repeat-aware modeling and correction of short re...010 PubMedCentral Two-stage Poisson model for testing RNA-seq data. Aue...xt-generation RAD sequencing of a non-model organism. Baxter et al., PLoS...3769 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
List of generic simulation software/...ion under various demographic models. http://users-birc.au.dk/mail...ASYPOP is an individual based model intended to simulate datasets...ontrib/archive/kernelpop/MaCS Markovian Coalescent Simulator http...structure-based substitution models http://code.google.com/p/pro...3727 days ago
List of In-silico Binding Site Prediction Tools
Following are the list of In-silico...by solvent accessible surface model (Richards' surface) and by molecular surface model (Connolly's surface), all cal...function prediction using 3D models of proteins. ProBiS: http:/...ted ligand docking or in situ modeling. Comparing the shape simil...3734 days ago
