Results for "high-throughput"
Blogs
Five points for bioinformatics software/tools
In the bioinformatics sector we mostly spend time on computational analysis of huge amounts of data and try to make sense of it, biologically. But, most of the newbie bioin...3696 days ago
List of bioinformatics workflow management tools !
Here are list of Workflow Managers BigDataScript – A cross-system scripting language for working with big data pipelines in computer systems of different...1131 days ago
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Bookmarks
Next Generation Sequencing (NGS) Tutorials
...r whole-exome data http://www.biomedcentral.com/1471-2105/14/S7/S11 DDBJ read annotation pipeline: a cloud computing-based pipeline for high-throughput analysis of next-generation s...3476 days ago
RNA Sequencing Helps Identify Functional Variants from GWAS
...nowadays is figuring out how the identified loci relate to disease. As reported last month in Nature and its associated journals, advances in high-throughput RNA sequencing are providing...3805 days ago
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Files
- The Leiden University Medical Center is a modern university medical centre for research, instruction and patient care with a high quality profile and a strong scientific or...
3817 days ago
Applied Statistics for Bioinformatics using R
The purpose of this book is to give an introduction into statistics in order to solve some problems of bioinformatics. Statistics provides procedures to explore and visuali...2064 days ago
Pages
BioRuby :Ruby packages for biologist
BioRuby is a package of Open Source Ruby code, with classes for DNA and protein sequence analysis, alignment, database parsing, and other Bioinformatics tools.BioRuby proje...3936 days ago
- I found several useful bioinformatics articles which exaplain, define and elaborate the bioinformatics in scientific way. Therefore, instead of writting it again I dec...
3910 days ago
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Top-level pages
- ...dern DNA sequencing era which resulted in further invention, improved development toward new advanced strategies of high-throughput DNA sequencing, so called the “high-throughput next generation sequencing&rd...
3937 days ago
- Data mining, the extraction of hidden predictive information from large databases. Data mining is becoming an increasingly important tool to transform this data into inform...
3935 days ago
- +29 more Top-level pages
Wire posts
News
- PhylomeDB is a public database for complete collections of gene phylogenies (phylomes). It allows users to interactively explore the evolutionary history of genes...
3908 days ago
High Density Sheep SNP Genotyping Chip released!!!
If you are working on Sheep genomics then there is a good news for you. FarmIQ in conjunction with Illumina and the International Sheep Genomics Consortium (ISGC) are today...3886 days ago
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Opportunity posts
Structural polymorphism analysis from NGS data
The LabEx BASC (Biodiversity, Agroecosystems, Society, Climate), a network of 13 laboratories of the Paris-Saclay Scientific Cluster, is seeking a bioinformatician to analy...3938 days ago
- ...e networks that are based on a combination of published data. An important part of the generated data that underlies this project consists of high-throughput sequencing of DNA and mRNA of...
3938 days ago
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ResearchLabs posts
Queensland Centre for Medical Genomics, Grimmond Lab
Queensland Centre for Medical Genomics Research Area: pancreatic cancer; ovarian cancer; prostate cancer; bowel cancer; brain cancer; endometrial cancer; breast cancer; personalised medicine; high-throughput genomics Link @ http://www.imb.uq.edu.au/sean-grimmond3937 days ago
- Statistical functional genomics in experimental medicine The genome projects and the accelerated development of high-throughput genomic technologies such as microarrays have revolutionis...
3937 days ago
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Video
Introduction to Bioinformatics - Week 2 - Lecture 1
...[ http://ocw.metu.edu.tr ] Course Title: Introduction to Bioinformatics Lecture Title: Introduction to biology, biological databases, and high-throughput data sources. Overview of bio...3892 days ago
Introduction to Bioinformatics - Week 2 - Lecture 2
...[ http://ocw.metu.edu.tr ] Course Title: Introduction to Bioinformatics Lecture Title: Introduction to biology, biological databases, and high-throughput data sources. Overview of bio...3892 days ago
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Bio-Scripts
Perl script to find coding regions in DNA sequences
#!/usr/bin/perl -w use strict; # if the number of input arguments is lower than 2 # return a message showing the error if (scalar(@ARGV) < 2) { print "dnalog...2144 days ago
- jitendra@jitendra-UNLOCK-INSTALL[SNP] wget https://github.com/broadinstitute/gatk/releases/download/4.0.2.1/gatk-4.0.2.1.zip --2018-08-30 11:47:20-- https://github.com/br...
2064 days ago
- +4 more Bio-Scripts
Polls
Which of the followings are the best place to study Bioinformatics ?
Bioinformatics is a major growth area and qualified Bioinformaticians are in high demand. An explosion in biological data has resulted from genome projects, next generation...3405 days ago
Tryst
Tryst with a Bioinformatician # Dr Altan Kara
...ckage is R/Bioconductor. The reason why I like this package is, it provides lots of useful tools for comprehensive analysis and comparison of high-throughput experimental data in an integ...2351 days ago
Groups
Perl(Practical Extraction and Reporting Language) is a family of high-level, general-purpose, interpreted, dynamic programming languages. Perl was originally developed by L...3942 days ago
...t years with the availability of huge genomic data and biological packages. Bioconductor provides tools for the analysis and comprehension of high-throughput genomic data. Bioconductor us...3940 days ago
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Tags
GeneProf: analysis of high-throughput sequencing experiment
GeneProf is a web-based, graphical software suite that allows users to analyse data produced using high-throughput sequencing platforms (RNA-seq and ChIP-seq; "Next-Generation Sequencing" or NGS): Next-gen analysis for next-gen data! Some of GeneProf's highlights include: Easy-to-use web-base...Tags: GeneProf, high-throughput, sequencing, experiment
2485 days ago
- Heap, that enables robustly sensitive and accurate calling of SNPs, particularly with a low coverage NGS data, which must be aligned to the reference genome sequences in advance. To reduce false positive SNPs, Heap determines genotypes and calls SNPs at each site except for sites at the both end ...
Tags: Heap, sensitive, accurate, SNP, detection, tool, low-coverage, high-throughput, sequencing, data
2197 days ago
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Comments
Comment on "Short-read assembly using Spades !"
Short-read assembly is the process of constructing a genome sequence from a large number of short sequencing reads. SPAdes (St. Petersburg genome assemb...404 days ago
Comment on "Coronavirus Resources !"
The US government SARS-CoV-2 Interagency Group (SIG) developed a Variant Classification scheme that defines three classes of SARS-CoV-2 variants: Variant of...950 days ago
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