Tools to detect synteny blocks regions among multiple genomes
...ns among multiple complete genome sequences. http://syntenyminer.sourceforge.net/ AutoGRAPH ( http://autograph.genouest.org/), AutoGRAPH is an integrated web server for multi-species...2599 days ago
List of gene ontology software and tools
...aCore (MIT) GeneGo is a leading provider of data mining & analysis solutions in systems biology. MetaCore, GeneGo's flapship product, is an integrated software suite for functional...3699 days ago
CoronaVIR: Computational Resources on Novel Coronavirus (SARS-CoV-2 or COVID-19)
...drug molecules. These are predicted candidates, need to be validated by experimental Researchers, who have appropriate infrastructure. It is an integrated multi-omics repository dedica...1093 days ago
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BioRuby :Ruby packages for biologist
...ode, with classes for DNA and protein sequence analysis, alignment, database parsing, and other Bioinformatics tools.BioRuby project provides an integrated environment in bioinformatics...3936 days ago
Awesome perl frameworks, libraries and software - PART 2
...n ollyg/Catalyst-Plugin-AutoCRUD - Development of Catalyst::Plugin::AutoCRUD Perl distribution nlewis/Net-ILO - Perl interface to HP Integrated Lights-Out NET-A-PORTER/NAP-...2483 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...(6):e21400, 2011. PubMedCentral Artemis: an integrated platform for visualization an...82, 2011. Full Text, Home Page Rainbow: an integrated tool for efficient clustering...rowser is on the FAQ list A manual for the Integrated Genome Browser visualization...3768 days ago
List of bioinformatics open source projects/software.
...roprietary Vector NTI, a tool to analyze and edit DNA sequence files Integrated Genome Browser http://bioviz...gene transfer detection, Reticulograms, Substitution models) UGENE integrated bioinformatics tools Visomic...3746 days ago
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Structural polymorphism analysis from NGS data
...oinformatics developments and implementation of methods for accommodating the high level of repetitiveness of complex genomes. The tools will be integrated into pipelines and made avail...3938 days ago
Postdoc Positions - Mammalian Transcriptome Evolution at SIB
...of protein-coding genes, alternative splicing, microRNAs, long noncoding RNAs, and dosage compensation. The postdoctoral fellow will perform integrated evolutionary/bioinformatics a...3907 days ago
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Dr. Ken Buetow: IS & Personalized Medicine Lecture-Part 1
...this mission through a systems approach in which genetic analytic approaches are applied to multiple high-throughput molecular characterizations integrated through informatics. The Bue...3859 days ago
Install ATOM editor on Elemantory OS / Ubuntu
...ored output. #Atom is essentially a text editor that you can use for coding. But did you know that you can turn Atom into a full-fledged IDE (integrated development environment) like...1165 days ago
Bash commandline to install Anaconda !
#The line begins with $ are the commands $ mkdir tmp $ cd tmp/ $ curl -O https://repo.anaconda.com/archive/Anaconda3-2019.03-Linux-x86_64.sh % Total % Rec...1544 days ago
Tryst with a Bioinformatician # Dr Altan Kara
...me analysis to reveal the molecular profile of the disease through an integrated approach, and to develop an e...redictor by using a support vector machine. By using this technique I integrated six different protein-protein...2351 days ago
GIGGLE: a search engine for large-scale integrated genome analysis
GIGGLE is a genomics search engine that identifies and ranks the significance of genomic loci shared between query features and thousands of genome interval files. GIGGLE (https://github.com/ryanlayer/giggle) scales to billions of intervals and is over three orders of magnitude faster than existi...Tags: GIGGLE, search, engine, large-scale, integrated, genome, analysis
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DMINDA2: an integrated web server for DNA motif identification and analyses
DMINDA (DNA motif identification and analyses) is an integrated web server for DNA motif identification and analyses More at http://bmbl.sdstate.edu/DMINDA2/ https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4086085/Tags: DMINDA2, integrated, web, server, DNA, motif, identification, analyses
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Comment on "List of non-commercial NGS genotype-calling software"
Delly – Structural variant discovery by integrated paired-end and split-read analysis. [ paper-2012 ] lumpy – lumpy: a general probabilistic framework f...1131 days ago
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