Bioinformatics tools for telomere to telomere assembly !
● Merfin – k-mer-based assembly and variant calling evaluation for improved consensus acc...ence built from haplotype-resolved genome assemblies in conjunction with k-mer count information from raw, s...975 days ago
Frequently used bioinformatics tools for viral genome analysis !
...: GAGE: A critical evaluation of genome assemblies and assembly algorithms. Salzberg, S. L. et al. Genome Res. 22, 557-67 (2012). KMC: Disk-based k-mer counting on a PC. Deorowicz,...1030 days ago
Useful Bioinformatics Analysis Tools !
...sp;CoMeta: Classification of Metagenomes Using k-mers, PLOS ONE, 2015; 1...ll; Deorowicz, S., FQSqueezer: k-mer-based compression of sequenci...(22):4791–4793, KMC Memory frugal k-mer counter. • K...846 days ago