Results for "kallisto"
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kallisto: a program for quantifying abundances of transcripts from bulk and single-cell RNA-Seq data
kallisto is a program for quantifying abundances of transcripts from bulk and single-cell RNA-Seq data, or more generally of target sequences using high-throughput sequencing reads. It is based on the novel idea of pseudoalignment for rapidly determining the compatibility of reads ...Tags: kallisto, program, quantify, abundances, transcripts, bulk, single-cell, RNA-Seq, data
1929 days ago
Modular, efficient and constant-memory single-cell RNA-seq preprocessing
With kallisto | bustools you can Generate a cell x gene or cell x transcript equivalence class count matrix Perform RNA velocity and single-nuclei RNA-seq analsis Quantify data from numerous technologies such as 10x, inDrops, and Dropseq. Customize workflows fo...Tags: Modular, efficient, constant, memory, single-cell, RNA-seq, preprocessing, bustool, kallisto
1110 days ago
