Results for "library"
Bio-Scripts
R script to visualize fastANI core-genome comparison
...#Parse command line arguments query_fasta=commandArgs(TRUE)[1] subject_fasta=commandArgs(TRUE)[2] fastANI_visual_file=commandArgs(TRUE)[3] library(genoPlotR) #Read fastANI o...1091 days ago
- bio
2459 days ago
Plot the clock using Lastz -gerenal outfile
use strict; use warnings; use Statistics::R ; use List::Util qw(sum); #Usage perl clockPlot.pl Palindrome.palfc 1500 my $R = Statistics::R->new() ; $R->startR...2288 days ago
Plot the density of genes in R
...stalled, if so, load it, # if not, install and load it if("ggplot2" %in% rownames(installed.packages())){ library(ggplot2) } else { install.packages("ggplot2") library(ggplot2) } # import a tex...2274 days ago
Plot custom gene density with R
library(karyoploteR) pp2239 days ago
Install Parrot Virtual Machine !
...rrot - Should parrot link against a shared library.........yes. inter::types -........done. auto::isreg - Does your C library have a working S_ISREG..........-include add path to include search -L --library add path to library search...1527 days ago
- .../zlib-1.2.7/CMakeFiles/zlibstatic.dir/zutil.o [ 16%] Linking C static library libz.a [ 16%] Built target z...tic.dir/internal/utils/BamException_p.cpp.o [ 56%] Linking CXX static library libbamtools.a [ 56%] Built t...
2088 days ago
- ...the insert size distribution of a paired-end library. CollectInsertSizeMetric...ormation on alignment data CollectJumpingLibraryMetrics (Picard) Collec...from a SAM/BAM/CRAM by read group, sample and library name SplitSamByLibrary (...
2065 days ago
- library(vcfR) # Input the files. vcf
2050 days ago
Generates a genome coverage plot with R
library(CoverageView) ##draw a coverage plot for a test case BAM file #get a BAM test file treatBAMfile2045 days ago
