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Results for "liftover"

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• • Jitendra Narayan@admin

  

  liftover

  Convenient conversions between genome assemblie. The liftover package makes it easy to remap genomic coordinates to a different genome assembly. More at https://github.com/aaronwolen/liftover https://www.bioconductor.org/help/workflows/liftOver/

  Tags: Bioinformatics, Computational Biology, Education, liftover, N50, NGS, Assembly, Genomics

  2993 days ago

• • Jitendra Narayan@admin

  

  flo

  flo - same species annotations lift over pipeline Lift over is the process of transferring annotations from one genome assembly to another. Usually lift over is done because there is a new, improved genome assembly for the species and good quality annotations (maybe manually curated or experimen...

  Tags: Bioinformatics, Flo, Liftover, Annotation

  2991 days ago

• • Jit@jit.aber

  

  NCBI Remap

  NCBI Remap. This tool is conceptually similar to liftOver in that in manages conversions between a pair of genome assemblies but it uses different methods to achieve these mappings. It is also available through a simple web interface or you can use the API for NCBI Remap. More at http://www.ncbi...

  Tags: Bioinformatics, NCBI, NCBI Remap, Liftover, Annotation

  2990 days ago