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An algorithm is a computable set of steps to achieve a desired result. We use algorithms every day. For example, a recipe for baking a cake is an algorithm. Most programs, with the exception of some artificial intelligence applications, consist of algorithms. Inventing elegant algorithms -- algo...Tags: Bioinformatics, Algorithms, Computational Biology, Tutorials, Links
3930 days ago
Phylogenetic for Bioinformatics
Biologists estimate that there are about 5 to 100 million species of organisms living on Earth today. Evidence from morphological, biochemical, and gene sequence data suggests that all organisms on Earth are genetically related, and the genealogical relationships of living things can be represent...Tags: Phylogeny, Genomics, Tutorial, Softwares, PHYLIP, Lectures Notes, Links
3930 days ago
Can you please recommend me some tutorial for NGS data analysis?
Hi Bioinformatician,I am newbie bioinformatician interested in knowing something more about next generation sequencing (NGS) and learn to interpret the data obtained from these technologies. In particular I want to know what kind of analyses is possible to perform on these data and what kind of t...Tags: Bioinformatics, Computational Biology, NGS, Tutorial, Links, Data, Analysis, Tools
3591 days ago
Statistical for biological research
There is no disputing the importance of statistical analysis in biological research, but too often it is considered only after an experiment is completed, when it may be too late. This collection highlights important statistical issues that biologists should be aware of and provides practical ad...Tags: Bioinformatics, Stats, Biology, Book, Links
2724 days ago
- RNA-sequencing (RNA-seq) has a wide variety of applications, but no single analysis pipeline can be used in all cases. We review all of the major steps in RNA-seq data analysis, including experimental design, quality control, read alignment, quantification of gene and transcript levels, visualiza...
Tags: RNAseq, analysis, links
2335 days ago
- A lesson introducing the Snakemake workflow system for bioinformatics analysis. Prerequisites This is an intermediate lesson and assumes learners have already done some bioinformatics: Familiarity with the BASH command shell, including concepts like pipes, variables and loops. Knowledge o...
Tags: snakemake, tutorial, links, commands, learn
711 days ago
LINKS scaffolder bloomfilter setting !
➜ bin git:(master) ✗ ls -l total 68 drwxrwxr-x 3 urbe urbe 4096 Jun 15 12:15 lib -rwxrwxrwx 1 urbe urbe 65141 Jun 15 17:13 LINKS ➜ bin git:(master) ✗ pwd /home/urbe/Tools/LINKS_1.8.6/bin ➜ bloomfilter git:(master) ✗ swig -Wall -c++ -perl5 BloomFilter.i ➜ bloomfilter git:(master) ✗...Tags: LINKS, scaffolder, genome, Perl, Perl_Gthr_key_ptr, setting, anaconda
2135 days ago
