Commercial and public next-gen-seq (NGS) software
...s are Guy St C Slater and Ewan Birney from EMBL. C for POSIX. GenomeMapper - GenomeMapper is a short read mapping tool...g at Stanford University. TopHat - TopHat is a fast splice junction mapper for RNA-Seq reads. It aligns...3509 days ago
Software packages for next gen sequence analysis
...are Guy St C Slater and Ewan Birney from EMBL. C for POSIX. * GenomeMapper - GenomeMapper is a short read mapping tool...at Stanford University. * TopHat - TopHat is a fast splice junction mapper for RNA-Seq reads. It aligns...3233 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
...orithm uses k-mers and is based on colored de Bruijn graphs) Software (Python) http://github.com/cbib/MICADo General mapper Minimap Lightweight and fast read mapper and read overlap detector (us...2361 days ago
Tools for bacterial whole genome annotation
...nd Links Annotation) is KEGG's internal annotation tool for K number assignment of KEGG GENES using SSEARCH computation. Annotate Sequence in KEGG Mapper and Pathogen Checker in KEGG...2322 days ago
Bioinformatics Web Application Development with Perl
...and more. Rose::DB The lesser-known but no less powerful Rose::DB::Object builds on Rose::DB to provide an object-relational mapper for Perl. While its high leve...2312 days ago