Results for "markov model"
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Nucl2Vec: Local alignment of DNA sequences using Distributed Vector Representation
We demonstrate a novel approach forlocal alignment of DNA reads with respect to reference genome.For this process we have used Skip-gram model for creatingencoding(Nucl2Vec...1136 days ago
Next Generation Sequencing (NGS) Tutorials
Institute of computational biomedicine, Cornell University provide an NGS workshop tu...ch/training/training-activities-schedule/archive-2013.html Variant Detection (Model organism) Advanced tutorial h...3477 days ago
- Chromosome number is a remarkably dynamic feature of eukar...ganism. ChromEvol implements a series of likelihood models for the evolution of chromosome numbers. By comparing the fit of the different models to biological data, it may b...
3378 days ago
InfoGenomeR: Integrative reconstruction of cancer genome karyotypes
InfoGenomeR is the Integrative Framework for Genome Reconstruction that uses a breakpoint graph to model the connectivity among genomi...1086 days ago
Smash: An alignment-free method to find and visualise rearrangements between pairs of DNA sequences
...method/tool to find and visualise genomic rearrangements. The detection is based on conditional exclusive compression, namely using a FCM (Markov model), of high context order (typi...2921 days ago
- In machine learning, computers apply statistical learning techniques to aut...crolling. Using a data set about homes, we will create a machine learning model to distinguish homes in New Y...
2855 days ago
- ...genomics projects to use older, long-read technologies. Phymm, a new classification approach for metagenomics data which uses interpolated Markov models (IMMs) to taxonomically clas...
2754 days ago
- Beagle is a software package that performs genotype calling, genotype phasing, imputa...effect in version 4.1. If your data contains nuclear families and you want to model the parent-offspring relation...
2737 days ago
- ART is a set of simulation tools to generate synthetic nex...icking real sequencing process with empirical error models or quality profiles summariz...T can also simulate reads using user own read error model or quality profiles. ART supp...
2730 days ago
Many-Core Engine (MCE) for Perl example
MCE spawns a pool of workers and the...d, MCE follows a bank queuing model. Imagine the line being the d...el workers. MCE enhances that model by adding the ability to chun...process while running. MCE MODELS The models take Many-Core E...l control when utilizing this model. MCE::Flow is similar to MCE:...2641 days ago
