Results for "memory"
Bio-Scripts
Create genome scaffolding with Perl
...t exist", $projOpts->{"query"}), -verbose => 0}); } print(STDERR "Loading query sequences into memory..."); open(my $queryFile, "=...2293 days ago
Estimate Genome Size with Jellyfish and R
...etc. #-C -both-strands Count both strands #-m -mer-len=unit32 Length of the k-mer #-s -size=unit32 Hash size / memory allocation #-o -output=...2230 days ago
- ...es checking for string.h... yes checking for memory.h... yes checking for string...es checking for string.h... yes checking for memory.h... yes checking for string...es checking for string.h... yes checking for memory.h... yes checking for string...
2135 days ago
Install Parrot Virtual Machine !
...elp-debug -w --warnings -G --no-gc -g --gc ms2|gms|ms|inf set GC type --gc-dynamic-threshold=percentage maximum memory wasted by GC --gc-min...1521 days ago
- ...ols are run valid targets are: LOCAL: run using the in-memory spark runner SPARK:...--help OpenJDK 64-Bit Server VM warning: Insufficient space for shared memory file: 13132 Try using th...
2059 days ago
Perl script to break the contigs by 'N'
...); my @bases=split //,$seq; push(@bases,"E"); #This extra position marks the end of the contig my $n=0; #Sorry for this loop, but its less memory expensive than regular expres...2047 days ago
Installing ggplot2 and its dependencies on Ubuntu !
...... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for string...1534 days ago
- ...ofile: default Kernel Version: 4.15.0-88-generic Operating System: Ubuntu 18.04.4 LTS OSType: linux Architecture: x86_64 CPUs: 2 Total Memory: 3.594GiB Name: jit-HP-Pro-...
1493 days ago
Tadpole is 250x faster than SPADes assembler !
...filter. prefiltersize=0.2 (pff) Fraction of memory to use for prefilter. minpro...refilter until the remaining kmers will fit in memory. onepass=f If true...This will be passed to Java to set memory usage, overriding the program...960 days ago
