Results for "metagenome"
Top-level pages
List of generic simulation software/tools/resource with brief description and homepage !!!
...elsaccount.sourceforge.net/MetaSim A tool to generate collections of synthetic reads that reflect the diverse taxonomical composition of typical metagenome data sets http://ab.inf.uni-t...3721 days ago
Genome Assembly Tools and Software - PART1 !!
...ying bins (genomes) of the microbes in their metagenomes by simply providing assemble...ded as > 200 bp) currently widely-used in metagenome projects. Results of extensiv...me assembly using de Bruijn graph of matched metagenome as the reference EPGA2 &...2670 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
...(C++) https://github.com/marbl/mash Kraken Taxonomic assignment in metagenome analysis by exact k-mer...hub.com/jessieren/VirHostMatcher MetaFast Statistics calculation of metagenome sequences and the distances b...2355 days ago
Tools for bacterial whole genome annotation
...best way to get good quality annotation in a flash, which is particularly useful if you have loads of genomes or need to annotate a pangenome or metagenome. Note however that the qualit...2316 days ago
Some useful Bioinformatics links
...ibuted Memory Overlap-Layout-Consensus (OLC) Metagenome Assembler https://github.com...genomes https://github.com/lh3/fermi Multi-metagenome http://madsalbertsen.github....http://cgat.readthedocs.io/en/latest/recipes/metagenome_contigs_kmers.html2226 days ago
Bioinformatics tools for genome assembly !
...opore sequencing. CANA: An assembler for metagenomic data, particularly for complex and diverse microbial communities. Ra Assembler: A metagenome assembler for long reads, des...270 days ago
