Results for "metagenomics"
Users
Interests: Metagenomics3159 days ago
Blogs
Important Journals, Blogs and Forums for Bioinformaticians
...y digest of scientific microbiome papers, by Elisabeth Bik, Science Editor at uBiome. Living in an Ivory Basement: Titus Brown’s blog on metagenomics, open science, testing, repro...2632 days ago
Illumina based assembly pipeline steps !
...ant calling and consensus sequence generation routes (iVar variants and consensus; default for amplicon data || BCFTools, BEDTools; default for metagenomics data) Variant annotation (...866 days ago
Bookmarks
Next Generation Sequencing (NGS) Tutorials
...oolkit for Genome Analysis http://www.broadinstitute.org/gatk/ Metagenomics:http://www.nbic.nl/education/nbic-phd-school/course-schedule/ngsmetagenomics/ RNASeq:http://www.nbic.nl/e...3476 days ago
Orione – a web-based framework for NGS analysis in microbiology
...e novo assembly, scaffolding, bacterial RNA-Seq, gene annotation and metagenomics. However, the construction of...nities for data-intensive computational analyses in microbiology and metagenomics. Reference Cuccuru G1, Orsi...3563 days ago
- +21 more Bookmarks
Pages
Genome Assembly Tools and Software - PART2 !!
...mbly of GEnomesSAGE is a new string-overlap graph-based de novo genome assembler. Omega 1.0.2 – Overlap-graph de novo Assembler for MetagenomicsOmega is a software for a...2674 days ago
Bioinformatics in Africa: Part2 - Kenya
...evelopment of Bioinformatics Data Management Systems 6. Gene Mining 7. High Throughput Genotyping 8. Microarray data management and analysis 9. Metagenomics 10. Immunoinformatics 11. Hos...1173 days ago
Top-level pages
List of bioinformatics open source projects/software.
...earchers, and scientists. AMPHORA ("AutoMated Phylogenomic infeRence Application") http://wolbachia.biology.virginia.edu/WuLab/Software.html Metagenomics analysis software Anduril h...3745 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...ant calling and analysis of NGS data Supported workflows include: reference-guided and de novo genome and transcriptome assembly and analysis, metagenomics sample assembly, targeted res...2897 days ago
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Wire posts
Opportunity posts
Postdoctoral position in bioinformatics @ Sweden
...stiansson’s research group. We are focused on methods development for and analysis of next generation DNA sequencing, in particular comparative metagenomics and gene expression analysis...3937 days ago
4 positions in high throughput computational metagenomics and systems biology of natural products
...positions in high throughput computational metagenomics and systems biology of natura...the areas of high throughput computational metagenomics and systems biology of natura...-positions-in-high-throughput-computational-metagenomics-and-systems-biology-of-natura...3900 days ago
- +6 more Opportunity posts
ResearchLabs posts
- Breitbart’s lab has created a new branch of biology called metagenomics in which one can sample and sequence genetic material collected from the environment. Breitbart lab is located...
3871 days ago
- ...lution of molecular structures in the cell. They are intimately linked to each other. Our main research themes are: Domain annotation and metagenomics Transcriptomics and sequenc...
3256 days ago
- +2 more ResearchLabs posts
Bio-Scripts
- ...Split intervals into sub-interval files. -------------------------------------------------------------------------------------- Metagenomics:...
2064 days ago
Groups
Metagenomics is the study of genetic material from environmen...nformation: http://www.nature.com/nrmicro/focus/metagenomics/index.html http://www.plosco...aticssoftwareandtools.co.in/ngs.php http://blog.metagenomics.anl.gov/tools-and-data-used-i...3692 days ago
Tags
Metagenomics role in antibiotic resistance
Related latest article: http://www.nature.com/nature/journal/v509/n7502/pdf/nature13377.pdfTags: metagenomics, antibiotics resistant, sequencing
3614 days ago
Fancy Oneliner for Bioinformatics !!
This webpage lists some of the one-liners that we frequently use in metagenomic analyses. You can click on the following links to browse through different topics. You can copy/paste the commands as they are in your terminal screen, provided you follow the same naming conventions and folder struct...Tags: Bioinformatics, Analysis, Visualization, SAM, BAM, Oneliner, NGS, metagenomics
2848 days ago
- +12 more Tags
Comments
- ...le anything. It’s a low coverage synthetic metagenome, so no surprise. It does produce corrected reads though! These could be used in the metagenomics practical (hint!) Now try th...
2164 days ago
