Results for "microbial"
Bookmarks
Next Generation Sequencing (NGS) Tutorials
...etn0ctjmvaidPKLxM Variant Detection Introductory tutorial https://docs.google.com/document/pub?id=1ZRzrjjOCvtAu3m-IKL-rbJ1f4On60dDL_IEwG7oejdI Microbial de novo Assembly for Illumina...3476 days ago
- ...embly tutorial In this tutorial we carry out de novo assembly of a microbial genome. We have also written...rn a specific case of using Galaxy to carry out de novo assembly of a microbial genome. Small RNAs Basic...
3641 days ago
Swabs to Genomes: A Comprehensive Workflow
...sequencing, assembly, and basic analysis of microbial genomes, once a painstaking a...r to entry for many who may be interested in microbial genomics. The objective of th...environmental sample (a swab) to a published microbial genome; empowering even a lab...3545 days ago
- ...paring it to a reference database containing microbial and viral protein sequences....ble complete genomes from NCBI RefSeq or the microbial subset of the non-redundant p...RAM with a protein database comprising 4821 microbial genomes. Kaiju can also be us...
2857 days ago
Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm)
...ryotic Dynamic Programming Genefinding Algorithm) is a microbial (bacterial and archaeal) gene...ecognition tool (written in very vanilla C). It can analyze an entire microbial genome in 30 seconds or less....2673 days ago
- ...icient Tool for Accurately Reconstructing Single Genomes from Complex Microbial Communities Grouping large g...s assembled from shotgun metagenomic sequences to deconvolute complex microbial communities, or metagenome bi...
2606 days ago
- ...visualization tools for quickly analyzing thousands of intraspecific microbial genomes, including variant ca...core-genome alignment and visualization of thousands of intraspecific microbial genomes. Genome Biology, 15 (...
2639 days ago
- This project contains scripts and tutorials on how to assemble individual microbial genomes from metagenomes, as described in: Genome sequences of rare, uncultured bacteria obtained b...
2608 days ago
- This project contains scripts and tutorials on how to assemble individual microbial genomes from metagenomes, as described in: Genome sequences of rare, uncultured bacteria obtained b...
2598 days ago
ERGO 2.0 Bioinformatics suites
...ced genomes. Using Igenbio's proprietary algorithms, and the most comprehensive genomic database integrated with the largest collection of microbial metabolic and non-metabolic p...2534 days ago
