Results for "miniasm"

Blogs

Bookmarks

Files

Top-level pages

Bio-Scripts

  • Install miniasm in Linux / Ubuntu

    ...oads/MitoHunter$ sudo apt install miniasm Reading package lists... Don...EW packages will be installed: miniasm minimap 0 upgraded, 2 newly....com/ubuntu bionic/universe amd64 miniasm amd64 0.2+dfsg-2 [29.3 kB] G...p minimap (0.2-3) ... Setting up miniasm (0.2+dfsg-2) ... Processing...

    1513 days ago

Tags

  • Run miniasm assembler on nanopore reads !

    Miniasm is a very fast OLC-based de novo assembler for noisy long reads. It takes all-vs-all read self-mappings (typically by minimap) as input and outputs an assembly graph in the GFA format. Different from mainstream assemblers, miniasm does not have a consensus step. I...

    Tags: Run, miniasm, assembler, nanopore, reads

    2293 days ago

  • Minipolish: A tool for Racon polishing of miniasm assemblies

    Miniasm is a great long-read assembly tool: straight-forward, effective and very fast. However, it does not include a polishing step, so its assemblies have a high error rate – they are essentially made of stitched-together pieces of long reads. Racon is a great polishing tool th...

    Tags: Minipolish, tool, Racon, polishing, miniasm, assemblies

    1578 days ago

Comments