Results for "modular"
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RASTtk : algorithm for building custom annotation pipelines and annotating batches of genomes
...as become desirable to build a version of RAST that is both customizable and extensible. In this paper, we describe the RAST tool kit (RASTtk), a modular version of RAST that enables...2919 days ago
- ...um size genomes flexible toward many sequencing technologies (Illumina, 454 or Sanger) and library types (paired-end, mate pairs, fosmids) modular: every step can be ommited or...
2792 days ago
Modular, efficient and constant-memory single-cell RNA-seq preprocessing
...Kyung Hoi (Joseph) Min, Eduardo da Veiga Beltrame, Kristján Eldjárn Hjörleifsson, Jase Gehring & Lior Pachter† Modular and efficient pre-processing...1115 days ago
Mesquite: A modular system for evolutionary analysis
Mesquite is modular, extendible software for evolutionary biology, designed to help biologists...tics, while others do non-phylogenetic multivariate analysis. Because it is modular, the analyses available depen...2472 days ago
DFAST: a flexible prokaryotic genome annotation pipeline for faster genome publication
...h rich information such as pseudogenes, translation exceptions, and orthologous gene assignment between given reference genomes. In addition, the modular framework of DFAST allows use...2353 days ago
Mesquite: A modular system for evolutionary analysis
Mesquite is modular, extendible software for evolutionary biology, designed to help biologists...tics, while others do non-phylogenetic multivariate analysis. Because it is modular, the analyses available depen...2234 days ago
- MetaEuk is a modular toolkit designed for large-scale gene discovery and annotation in eukaryotic metagenomic contigs. Metaeuk combines the fast and sensitive homology search...
1197 days ago
HairSplitter: assembling long reads in an unknown number of haplotypes
...s of HairSplitter: Not very fast: it re-polishes the whole assembly Limited in the number of haplotypes Strengths of HairSplitter: Very modular, can be used with any assembl...504 days ago
JBrowse 2: a modular genome browser with views of synteny and structural variation
igvjs - a create-react-app with igv package from npm installed. the igv.js is instrumented to output "DONE" to the console when finished, and to have an increased fet...364 days ago
