Results for "ncbi"
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Download mutliple fasta file from NCBI in one GO!!
if you have less time, then use three ways mentioned in bookmark link to extract/download all fasta sequences in single click given that you already have a list of GIs...3891 days ago
Next Generation Sequencing (NGS) Tutorials
...1 DDBJ read annotation pipeline: a cloud computing-based pipeline for high-throughput analysis of next-generation sequencing data. http://www.ncbi.nlm.nih.gov/pubmed/23657089...3468 days ago
- ...structing a genome 3D structure (b) from the sole knowledge of the contacts between different genomic regions (a) as determined by Hi-C (http://www.ncbi.nlm.nih.gov/pubmed/19815776)....
3399 days ago
- MetaPred2CS Web server is a meta-predictor based on Support Vector Machine (SVM) that combines 6 individual sequence based protein-protein interaction p...
2601 days ago
- CrossMap is a program for convenient conversion of genome coordinates (or annotation files) between different assemblies (such as Human hg18 (NCBI36) <> hg19 (GRCh37), Mouse mm...
2989 days ago
- NCBI Remap. This tool is conceptually similar to liftOver in that in manages...lso available through a simple web interface or you can use the API for NCBI Remap. More at http://www.ncbi.nlm.nih.gov/genome/tools/rema...
2987 days ago
- ...ion can be used for centromere identification for a large number of yeast species, even with a limited amount of Hi-C sequencing. Paper:http://www.ncbi.nlm.nih.gov/pubmed/25940625...
2986 days ago
RACA: Reference-Assisted Chromosome Assembly
...scaffolds generated by NGS and assemblers into longer chromosomal fragments using comparative genome information and paired-end reads. http://www.ncbi.nlm.nih.gov/pubmed/23307812...2932 days ago
PEAR: a fast and accurate Illumina Paired-End reAd mergeR
...eads within a couple of minutes on a standard desktop computer. More at http://www.exelixis-lab.org/web/software/pear Paper: http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3...2932 days ago
- ...genome and metagenome assembly accuracy, which can be used to identify misassemblies or to optimize the assembly process. More at http://www.ncbi.nlm.nih.gov/pubmed/23303509...
2912 days ago
