Results for "non-coding SNPs"
Top-level pages
"Bioinformatics is a science of biological predictions and analysis" -- Jitendra Narayan "The mathematical, statistical and computing methods that aim to solve b...3932 days ago
- Genomics is the study of the genomes of organisms. The field includes intensive efforts to determine the entire DNA sequence of organisms and fine-scale genetic mappin...
3927 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
Global overview papers Next generation quantitative genetics...-genome alignment & comparisons] Searching for SNPs with cloud computing. Langmea...l, Genome Biol 10(11):R134, 2009 Full Text Calling SNPs without a reference sequence....3764 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
List of generic simulation software/tools/resource with brief...cialization of the program GenomePop just to manage SNPs under more flexible and usefu...s rate matrices. http://www.cibiv.at/software/sissi/SNPsim Coalescent simulation of ho...3722 days ago
Commercial and public next-gen-seq (NGS) software
Integrated solutions CLCbio Genomics Workbenc...clean and filter contigs, look for snps and indels., filter snps, do statistics for: reads, co...dated version uses a BWT. Can call SNPs and INDELs. Author is Ruiqian...ection tool. It detects homozygous SNPs and indels by aligning shotgu...3504 days ago
Apps for Busy Bioinformatics Researchers !!!
DNAApp: DNAApp: for iPhone/iPad This is an iOS app that allows for the opening..., with predictions of computationally annotated functional impacts of SNPs. Database entries represent nsSNPs in dbSNP and 1000 Genomes col...3526 days ago
Software packages for next gen sequence analysis
Integrated solutions * CLCbio Genomics Workbench - de novo and...sequences. The updated version uses a BWT. Can call SNPs and INDELs. Author is Ruiqian...polymorphism detection tool. It detects homozygous SNPs and indels by aligning shotgu...3227 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...eeBayes Description: finds SNPs, Indels, MNPs; reports variants bas...-line application to identify SNPs between tumor/normal pairs- p...ts; can score both coding and non-coding variants; Four tools: V...ut: File containing annotated SNPs is copied from SNP list and s...2894 days ago
Genome Assembly Tools and Software - PART1 !!
...conserved genes (and – in theory – non-coding regions) that can occur in mu...;directory). The assembly does not only encode SNPs and short INDELs, but also re...validating polymorphism candidate sites (e.g., SNPs) reported by polymorphism dis...2671 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
analog -- A feature that appears similar in two taxa which have originated from two different ancestors. ancestor -- Any organism, population, or species from which s...2447 days ago
