Results for "output"
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Public Databases for Bioinformatics !
...o = multiprocessing.Queue() for i in xrange(NSIMS): todo.put(i) for i in xrange(NPROC): todo.put('FINISHED') ofp = ProcessSafeOPStream( open("output.txt", "w") ) pids = [] fo...1129 days ago
- ...CuffDiff* EdgeR* DESeq2 Advanced Command Line Tutorial Graphical Output with CummeRbund introduces so...PC (explained in the Tutorial). You will learn how to produce graphical output from RNA-Seq analysis previou...
3642 days ago
irishgrid: Irish Grid Mapping System
Perl module for creating geographic 10km-square maps using either SVG or PNG (with GD library) output format. Originally design to map the location of objects in a 10 km map IrishGri...3407 days ago
Barrnap: Bacterial ribosomal RNA predictor
...16S), archaea (5S,5.8S,23S,16S), mitochondria (12S,16S) and eukaryotes (5S,5.8S,28S,18S). It takes FASTA DNA sequence as input, and write GFF3 as output. It uses the new NHMMER tool...2539 days ago
- ...ger structural features of chromosomes, their correlation to genomic and epigenomic features, and on comparative studies. It uses simple input and output formats and can therefore eas...
2995 days ago
- Understanding Following table and graphs Duplication level kmer profile per base GC content per base N content per base quality per base sequence content per s...
2932 days ago
Smash: An alignment-free method to find and visualise rearrangements between pairs of DNA sequences
...l exclusive compression, namely using a FCM (Markov model), of high context order (typically 20). For visualisation, Smash outputs a SVG image, with an ideogramoutput architecture, where the patte...2920 days ago
YASS :: genomic similarity search tool
...t;->T]) using different scoring schemes with bit-score and E-value evaluated according to the sequence background frequencies parameterizable output filter for low complexity rep...2914 days ago
- ...nging the input type automatically changes the output options to the ones specific...or the input selected. Then select one or more output types and add your identifier...ce will vary widely depending on the number of outputs and the options selected. Co...
2883 days ago
- ...ers are closely tied to a specific assembly program, Bambus accepts the output from most current assemblers...on include alignment to a reference genome (Bambus can directly use the output of MUMmer), physical mapping...
2808 days ago
