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Coupling established clinical–pathological indexes...genes found in chronic myelogenous leukemia. The breast cancer drug trastuzumab (Herceptin)....bionews-tx.com/news/2013/08/15/how-the-impact-of-cancer-genomics-on-precision-medicin...3896 days ago
- What is the epigenome? What does the epigenome do? What makes up the epigenome? Is the epigenome inherited? What is imprinting? Can the epigenome change? What makes the epigenome change? How do changes in the epigenome contribute to cancer? How are researchers exploring the epigenome?
3854 days ago
InfoGenomeR: Integrative reconstruction of cancer genome karyotypes
InfoGenomeR is the Integrative Framework for Genome Recons...ts at the genome-wide scale. InfoGenomeR integrates cancer purity and ploidy, total CNAs...identify the optimal breakpoint graph representing cancer genomes. More at http...1086 days ago
- The accurate description and annotation of structural variants can be complex. ...omenclature recommendations [http://www.hgvs.org/rec.html]. http://cancer.sanger.ac.uk/cosmic/help/rear...
2762 days ago
- Development of cancer is driven by somatic alterations, including numerical and structural chromosomal aberrations. Currently, several computational methods are available and...
2144 days ago
- Visualization has played an extremely important role in t...xample, here we show a gene fusion in the SK-BR-3 breast cancer cell line linking the genes C...two genes (Figure 1a). More gene fusions of this cancer cell line are investigated in...
2743 days ago
- Seven Bridges is the biomedical data analysis company accelerating breakthroughs in genomics research for cancer, drug development and precisi...
2736 days ago
- EXCAVATOR2 is a collection of bash, R and Fortran scripts and codes that analyses Who...ification of CNVs in small as well as large-scale re-sequencing population and cancer studies. Lastly, it’s o...
2703 days ago
- maftools - An R package to summarize, analyz...iles. Introduction. With advances in Cancer Genomics, Mutation Annotation...used to store variants detected. The Cancer Genome Atlas Project has seqe...F files from large-scale cohort based cancer studies. bioRxiv, 2016. doi:...
2625 days ago
SeqMule: Automated human exome/genome variants detection
SeqMule takes single-end or paird-end FASTQ or BAM files, generates a script consisti...ownloading databases. SeqMule can be used for both Mendelian disease study and cancer genome study.2606 days ago
