Results for "overlap"
Bio-Scripts
Tadpole is 250x faster than SPADes assembler !
...te: Shave and rinse can produce substantially better assemblies for low-depth data, but they are very slow for large metagenomes. Overlap parameters (for overlapping paired-end reads only):...960 days ago
Raku script to find overlaps between two bed files !
...$start1 = @fields1[1]; my $end1 = @fields1[2]; # Check for overlaps with intervals in the second...my $end2 = @fields2[2]; # Check for chromosome match and overlap if $chr1 eq $chr2 &&...78 days ago
Perl script to find overlaps between two bed files !
#!/usr/bin/perl use strict; use warnings; # Check if the correct number of arguments are provided if (@ARGV != 2) { die "Usage: $0 file1.bed file2.bed\n"; } # Read the contents of the two BED files my $file1 = shift @ARGV; my $file2 = shift @ARGV; open my $fh1, '78 days ago
