Results for "pacbio"
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Bioinformatics algorithms tutorials
Useful bioinformatics tutorial, such as De Bruijn Graphs for NGS AssemblyAlgorithms for PacBio ReadsSoftware and Hardware Concepts for BioinformaticsFinding us in Homolog.us (Search...3594 days ago
GraphMap - A highly sensitive and accurate mapper for long, error-prone reads
...d also presents a significant improvement over the state-of-the-art for PacBio read mappers. GraphMap was a...ange of read lengths and error profiles, including: Illumina, PacBio and Oxford Nanopore...3215 days ago
Scaffolding of a bacterial genome using MinION nanopore sequencing
...ontigs cannot be easily resolved. A new generation of sequencers offering substantially longer reads is emerging, notably the Pacific Biosciences (PacBio) RS II system and the MinION...3215 days ago
CANU: Assembling Large Genomes with Single-Molecule Sequencing and Locality Sensitive Hashing.
Canu is a fork of the Celera Assembler designed for high-noise single-molecule sequencing (such as the PacBio RSII or Oxford Nanopore MinION). The software is currently alph...2904 days ago
- This tutorial includes resources for learning more about PacBio data and bioinformatics analysis, and includes content suitable for both beginners and experts. Below are links to trai...
2617 days ago
OPERA : Optimal Paired-End Read Assembler
...latest release contains the wrapper script OPERA-long-read that enables scaffolding with long-reads from third-generation sequencing technologies (PacBio or Oxford Nanopore). The manu...2785 days ago
- ...duced by Oxford Nanopore Technologies Ltd. It can be used to scaffold high-quality draft genome assemblies with any long sequences (eg. ONT reads, PacBio reads, another draft genomes,...
2729 days ago
- ...ram uses information from assemblies made with illumina short reads and PacBio long reads to improve contiguities of an assembly generated with PacBio long reads alone. This is cou...
2684 days ago
PBSuite: Software for Long-Read Sequencing Data from PacBio
...w.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0047768PBJelly is a highly automated pipeline that aligns long sequencing reads (such as PacBio RS reads or long 454 reads in...2614 days ago
Pacbio Long Reads Compatible Software and Tools
...he following software packages are known to be compatible with PacBio® data, in addition to PacBio's own SMRT® Analysis suit...mmercial software. Know of any other open source software for PacBio data? Email us. Softwar...2598 days ago
