Results for "packages"

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  • How to install Perl modules manually, using CPAN command, and other quick ways

    As a bioinformatics programmer, and crunchy data analyser you need to install several perl modules and dependencies. Installing Perl modules manually by resolving all the dependencies is  tedious and annoying process. Some of the packages like GD is the real pain. However, Installing Perl mo...

    Tags: Perl Modules, Perl, Packages, Yum, Quick, CPAN, BioPerl

    3913 days ago

  • R getting strong for NGS analysis http://manuals.bioinformatics.ucr.edu/home/ht-seq #Packages #NGS #R #Bioconductor #Bowtie #Sequence #Analysis #SNP

    Tags: Packages, NGS, R, Bioconductor, Bowtie, Sequence, Analysis, SNP

    3588 days ago

  • Next generation sequencing in R or bioconductor environment

    There are many R software and bioconductor packages for NGS data analysis, some of them are as follows Biostrings The Biostrings package from Bioconductor provides an advanced environment for efficient sequence management and analysis in R. It contains many speed and memory effective string con...

    Tags: Bioinformatics, Computational Biology, NGS, R, Bioconductor, Packages, Modules, Next generation sequencing

    3587 days ago

  • A guide for complete R beginners :- Installing R packages

    Part of the reason R has become so popular is the vast array of packages available at the cran and bioconductor repositories. In the last few years, the number of packages has grown exponentially! This is a short post giving steps on how to actually install R packages. Let’s suppose you wa...

    Tags: Bioinformatics, Computational Biology, Education, Tutorial, R, Basics, Syntax, Install, Packages

    3320 days ago

  • CSBB-v1.0

    CSBB is a command line based bioinformatics suite to analyze biological data acquired through varied avenues of biological experiments. CSBB is implemented in Perl, while it also leverages the use of R and python in background for specific modules. Major focus of CSBB is to allow users from biolo...

    Tags: Bioinformatics, CSBB-v1.0, Tools, Modules, Packages, Analyse, Perl, R

    2830 days ago

  • How to install Perl packages on servers?

    I am problem installing Perl module on cluster/server without root. Can you please recommend me a easy way or alternative way to install it.

    Tags: Bioinformatics, Perl, Server, Cluster, Packages, Modules, Install, Script

    2594 days ago

  • WGS Celera Assembler version 8.3rc2

    These are release notes for Celera Assembler version 8.3rc2, which was released on May 24, 2015.This distribution package provides a stable, tested, documented version of the software.  The distribution is usable on most Unix-like platforms, and some platforms have pre-compiled binary distri...

    Tags: Bioinformatics, wgs-assembler, WGS, PBcR, Pacbio, Correct, Packages, Tools, Simulation, Fastq

    2545 days ago

  • R 3.5.0 has been Released!

    The latest version of R is a major release! It comes with a ton of new features, including performance and speed improvements All R packages will now be byte-compiled, hence boosting packages installed from GitHub You may need to re-install all previously installed R packages; old scripts how...

    Tags: R, Packages, Released

    2164 days ago

  • Top 40 R packages https://www.r-bloggers.com/june-2019-top-40-r-packages/ #R #Packages

    Tags: R, Packages

    1708 days ago

  • Getting Started with Nextflow

    Introduction to Bioinformatics workflows with Nextflow and nf-core Getting Started with Nextflow Objectives Understand What a workflow management system is. Understand the benefits of using a workflow management system. Explain the benefits of using Nextflow as part of your bioinformatics wo...

    Tags: Start, Nextflow, Bioinformatics, Packages

    923 days ago