Results for "paper"
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...It can be used to scaffold high-quality draft genome assemblies with any long sequences (eg. ONT reads, PacBio reads, another draft genomes, etc) Paper at https://gigascience.b...2724 days ago
- ...ditional sequencing cost, generate new, modified reference sequence that is closer to the actual sequenced genome and has a full coverage. In this paper, we describe our approach and...
2703 days ago
e-RGA: enhanced Reference Guided Assembly of Complex Genomes
...tools able to assemble, de novo, an organism sequenced with short reads, the results are still far from those achievable with long reads. In this paper, we propose a novel method th...2679 days ago
PBSuite: Software for Long-Read Sequencing Data from PacBio
...within the PBSuite code found in downloads.----- PBJelly -----Read The Paper http://www.plosone.org/a...ble to produce upgraded draft genomes. ----- PBHoney -----Read The Paperhttp://www.biomedcentral.com/1...2609 days ago
npScarf: Scaffolding and Completing Assemblies in Real-time Fashion
...analysis of positional information such as gene ordering and the detection of genes from mobile elements (plasmids and genomic islands). Complete paper at https://www.ncbi.nlm....2524 days ago
AVID: A Global Alignment Program
...AVID program, are publicly available. See Web Site References section for AVID Web address and Web addresses for other programs discussed in this paper....2523 days ago
NovelSeq: Novel Sequence Insertion Detection
The NovelSeq framework is designed to detect novel sequence insertions using high throughput paired-end whole genome sequencing data. http://novelseq.sourceforge.net/Home Paper at https://www.ncbi.nlm.nih.gov/pubmed/203857262507 days ago
LIBSVM -- A Library for Support Vector Machines
...ution estimation (one-class SVM). It supports multi-class classification. Since version 2.8, it implements an SMO-type algorithm proposed in this paper:R.-E. Fan, P.-H. Chen, and C....2453 days ago
DRAWID: user-friendly Java software for chromosome measurements and idiogram drawing
...chromosome analysis," explain the scientists. "The output of the program is Microsoft XL table and publish-ready idiogram picture." Find their paper openly published with us at:&...2335 days ago
3d-dna: 3D de novo assembly (3D DNA) pipeline
...Unless otherwise noted, all terminology below is consistent with this paper, and all references to figures and tables in this readme refer to this paper. Specifically, some of the te...2305 days ago
