Results for "pathway enrichment"

Blogs

  • List of gene ontology software and tools

    ...ommonly used old and new GO term enrichment determination tools. These...EasyGO is designed to automate enrichment job for experimental biolo...gy (GO) terms, KEGG and REACTOME pathways, and TRANSFAC motifs to a user-...factors, signaling and metabolic pathways, disease and toxicity, and the...

    3699 days ago

  • Live Webinar on RNA-Seq Data Analysis on 9 Nov 2016

    Live Webinar on RNA-Seq Data Analysis Abstract: Strand NGS supports an extensive workflow for the analysis and vis...an also detect gene fusion events. Further downstream analysis such as GO and pathway an...

    2745 days ago

Bookmarks

  • eFORGE.v1.2

    The eFORGE tool provides a method to view the tissue spec...d in an EWAS study, and analyses whether there is enrichment for overlap of putative funct...compared to matched background DMPs. It assesses enrichment on a per cell type basis, sin...

    2736 days ago

  • MEME suite

    Motif based sequence analysis suits  The MEME Suite allows the biologist to dis...), predicting the biological roles of motifs (GOMo), measuring the positional enrichment of sequences for known motifs...

    2680 days ago

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Top-level pages

Wire posts

  • A tool to edit and analyze biological pathways. http://www.pathvisio.org/ #Pathway #Analyse #Tool #Edit #Biological

    3598 days ago

  • Ten Years of Pathway Analysis: Current Approaches and Outstanding Challenges. http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.1002375 #Pathway #Challenges #Tools

    3598 days ago

  • +10 more Wire posts

News

  • Petrol from Ecoli

    "In recently published paper (entitled "Microbial Production of Short-chain Alkanes") in Nature journal on Septembe...normal intracellular fatty acid metabolites, and introduced a novel synthetic pathway fo...

    3860 days ago

  • R package for visualising GO enrichment

    An R package that visualizes the GO enrichment results as word clouds and arranges them together with figures of experimental data. This allows us to draw informative summary plots for ana...

    3930 days ago

  • +5 more News

Opportunity posts

ResearchLabs posts

Tags

  • Pathway Analysis

    Pathway Analysis is usually performed with aim to enrich the genes with their functional information and reveal the underlying biological mechanisms pursue by genes. Pathway Analysis is not only limited to what biological pathways a particular set of expressed genes follow but also to disclose th...

    Tags: pathway enrichment, kegg, reactome, go, blast2go, RNA-Seq, RNA, Sequencing

    3486 days ago

Comments

  • Comment on "Pathway Analysis"

    Pathview is a tool set for pathway based data integration and vis...of biological data on relevant pathway graphs. All users need is to...ir data and specify the target pathway. Pathview automatically downl...lso seamlessly integrates with pathway and gene set (enrichment) analysis tools for large-sca...

    3026 days ago