Results for "pipelines"
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Next Generation Sequencing (NGS) Tutorials
...eration sequencing http://hmg.oxfordjournals.org/content/19/R2/R227.full.pdf ============================================== NGS data analysis pipelines Detecting and annotating g...3472 days ago
- ...ed Genotyper* FreeBayesEach of these tools takes as its input a BAM file of aligned reads and generates a list of likely variants in VCF format Pipelines are for those who are comfort...
3638 days ago
Orione – a web-based framework for NGS analysis in microbiology
...notation and metagenomics. However, the construction of computational pipelines that use different software p...ing of publicly available research software and specifically designed pipelines to build complex, reproducibl...3559 days ago
Bioinformatics Made Easy Search: Bioinformatics tools and run genomic analysis in the cloud
...bioinformatics tools immediately available to run via an easy-to-use web interface and allows an accurate search across all functions, tools and pipelines. With InsideDNA, you can upl...3166 days ago
Ensembl comparative genomics resources
...he focus on vertebrates makes Ensembl an ideal system to perform and support vertebrate comparative genomic analyses. We use robust software and pipelines to produce reference comparat...2973 days ago
Awesome bioinformatics pipelines !
A curated list of awesome pipeline toolkits ... https://github.com/pditommaso/awesome-pipeline2942 days ago
RASTtk : algorithm for building custom annotation pipelines and annotating batches of genomes
...extensible. In this paper, we describe the RAST tool kit (RASTtk), a modular version of RAST that enables researchers to build custom annotation pipelines. RASTtk offers a choice of so...2914 days ago
- ...tated BUSCO gene models built during genome assessments provide a comprehensive gene predictor training set for use as part of genome annotation pipelines. BUSCO assessments o...
2902 days ago
RCircos: an R package for Circos 2D track plots
...imple and flexible way to make Circos 2D track plots with R and could be easily integrated into other R data processing and graphic manipulation pipelines for presenting large-scale mu...2892 days ago
Bpipe - a tool for running and managing bioinformatics pipelines
...matics jobs that consist of a series of processing stages - known as 'pipelines'. January 20th, 2016 - New...amp; Oshlack A, Bpipe: A Tool for Running and Managing Bioinformatics Pipelines, Bioinformatics2890 days ago
