Results for "plant pathogen interaction"

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  • The First 50 Plant Genomes

    Plant scientists can exploit available 50 plant complete genomic data for their resequencing or other...molecular evolution. Complete information about these plant ge...https://www.crops.org/publications/tpg/articles/6/2/plantgenome...

    3811 days ago

  • Bioinformatics Protocols

    RNA Seq Basic Galaxy Tutorial RNA-Seq tutorial based on Trapnell et al. (2012...ChIP-Seq In this protocol we discuss ChIP-Seq: a method to analyze the interaction between proteins and DNA. A...

    3615 days ago

  • MetaPred2CS

    MetaPred2CS Web server is a meta-predictor based on&n...bines 6 individual sequence based protein-protein interaction prediction methods to predict...aryotic two-component system protein-protein interactions (PPIs). The methods implemen...

    2582 days ago

  • QuIN’s web server

    ...omic technologies for mapping interactions between DNA regions, e.g., C...generate genome-wide maps of interactions between regulatory elements....k representation of chromatin interaction maps enables effective data v...and their direct and indirect interactions.  AVAILABILITY: Q...

    2831 days ago

  • 4DGenome

    Records in 4DGenome are compiled through comprehensive lit...erimentally-derived and computationally-predicted interactions. The current release contain...y-derived and 3,605,176 computationally-predicted interactions in 5 organisms. Experimental...

    2824 days ago

  • CGView - Circular Genome Viewer

    GView is a Java package used to display and navigate bacterial genomes. GView is usef...iewer written by Paul Stothard. The goal of GView is to provide greater user interaction, and more flexibility in how...

    2747 days ago

  • Strudel

    Strudel is our graphical tool for visualizing genetic and physical maps of genomes fo...arkers, and explore syntenic relationships between genomes. All browsing and interaction with Strudel happens in real-...

    2736 days ago

  • MCscan

    MCscan is a computer program that can simultaneously scan multiple genomes to identify homolo...s as anchors. This is the toolset for generating the synteny correspondences in Plant Genom...

    2653 days ago

  • Quota synteny alignment

    Typically in comparative genomics, we can identify anchors, chain them into syntenic blocks a...descent. However, when comparing two genomes undergone ancient genome duplications (plant genom...

    2432 days ago