BOL: Results for "plots"

Results for "plots"

- Rahul Nayak@rahul
Estimate Genome Size
# Count k-mer occurrence using Jellyfish 2.2.6 jellyfish count -t 8 -C -m 19 -s 5G -o 19mer_out --min-qual-char=? sread_1.fastq sread_2.fastq # points for a histogram jellyfish histo -o 19mer_out.histo 19mer_out #Plot results using R ##load the data into dataframe19 dataframe19
2254 days ago
- Rahul Nayak@rahul
Estimate Genome Size with Jellyfish and R
jellyfish count -t 8 -C -m 19 -s 5G -o 19mer_out --min-qual-char=? /common/Tutorial/Genome_estimation/sample_read_1.fastq /common/Tutorial/Genome_estimation/sample_rea...
2236 days ago
- Jit@jit.aber
Downloading GATK !
...s PlotDenoisedCopyRatios (BETA Tool) Creates plots of denoised copy ratios PlotModeledSegments (BETA Tool) Creates plots of denoised and segmented cop...
2065 days ago
- Jit@jit.aber
Generates a genome coverage plot with R
library(CoverageView) ##draw a coverage plot for a test case BAM file #get a BAM test file treatBAMfile
2045 days ago