3925 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...Res 19(6):1068-76, 2009. Full Text Multiplexed shotgun genotyping for rapid and efficient genetic mapping...:610-7, 2011. Full Text Restriction-site Associated DNA (RAD) markers Rapid SNP discovery and genetic map...3762 days ago
List of bioinformatics open source projects/software.
...ochemical Algorithms Library (BALL) http://www.ball-project.org/ C++ library and framework for molecular modeling and visualization designed for rapid prototyping Bio4j http://bi...3740 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
...Case-Control Study Designs http://www.rannala.org/?page_id=241GENOME A rapid coalescent-based whole genome...ic interactions. https://sourceforge.net/projects/gensim/GWAsimulator A rapid whole genome simulation progr...3720 days ago
Commercial and public next-gen-seq (NGS) software
...of Washington. C as source. MUMmer - MUMmer is a modular system for the rapid whole genome alignment of fin...SAHA (Sequence Search and Alignment by Hashing Algorithm) is a tool for rapidly finding near exact matches...3502 days ago
Software packages for next gen sequence analysis
...Washington. C as source. * MUMmer - MUMmer is a modular system for the rapid whole genome alignment of fin...SAHA (Sequence Search and Alignment by Hashing Algorithm) is a tool for rapidly finding near exact matches...3226 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...Output: Displayed on web or can be downloaded in Excel or RDF format MutationTaster Description: (Last post on site 2014) Web app program; Rapid evaluation of disease causing...2892 days ago
Genome Assembly Tools and Software - PART1 !!
...ty assessment of de novo genome assemblies. Specifically it facilitates rapid detection of inconsistencies...complex multi-isoformic transcriptomes, such as snake venom glands, or rapidly evolving viral populations,...2669 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
...racter state for all mammals, whereas the "hairlessness" of whales is a derived state for one subclade within the Mammalia. radiation -- Event of rapid cladogenesis, believed to occ...2445 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
kallisto Transcript abundance quantification from RNA-seq data (uses pseudoalignment for rapid determination of read compatibility with targets) Software (C++) https://pacht...2354 days ago