Results for "read"
Users
Interests: Reading3943 days ago
- Interests: Reading Books
3353 days ago
- +5 more Users
Blogs
Five unique traits of effective computational biologist
...because it looked interesting; and the great biological programmer also read about the BioPerl packages, g...lso defend your finding with scientific words. Thanks to all of you for reading.3941 days ago
Five points for bioinformatics software/tools
...ools/software is that they’re free to download the source code and read exactly what the program does...itionally, most of the functionality that you need in your analysis is already coded into the program. Need...3698 days ago
- +39 more Blogs
Bookmarks
Comparison of Short Read De Novo Alignment Algorithms
Excellent article to introduce different sequencing methods along with tools for de novo assembly of sequencing reads and their relevant references. Title: Comparison of Short Read De Novo Alignment Algorithms Author: Nikhil Gopal3900 days ago
Next Generation Sequencing (NGS) Tutorials
...s DOI: 10.1093/bioinformatics/btr441 ngs_backbone: a pipeline for read cleaning, mapping and SNP cal...e-exome data http://www.biomedcentral.com/1471-2105/14/S7/S11 DDBJ read annotation pipeline: a cloud...3478 days ago
- +196 more Bookmarks
Files
- Hmm .. Don't worry you read it right .. this is not pi but bi ... "life of Bioinformatician(BI)". Disclaimer: This cartoon is solely designed to create humour and fun, not to offend any PI, supervisor or student.
3896 days ago
- ...//github.com/BioInf-Wuerzburg/proovread/raw/master/util/blasr-1.3.1/b...ng "OPERA-LG_v2.0.5/bin/preprocess_reads.pl" and have the following e...Finding the SA coordinates of the reads using BWA aln...[Thu Jun 14...FALCON-Unzip-Scaff.bamMapping long-reads using blasr.../home/urbe/Too...
2142 days ago
Pages
Bio++ : C Language libraries for your biological need
...th Bio++. J Now the time has been change, the biological programmers are ready to use the C++ libraries of...ove spaces, tokenize, switch between upper/lower case, etc.Applications: read options from a file or comman...3938 days ago
- ...er VSNS publication - this time aimed at highschool students, but fun to read for everyone. Includes...t By Frank A. Bisby, Science , 289: 2309 (2000). Are you ready for the revolution? By...
3911 days ago
- +10 more Pages
Top-level pages
- ...and in such manner that from the outcome we can read a definite answer, "yes" or "...amming avoids recomputing solutions that have already been computed. - The ma...nu.edu.au/~jason/hmmlinks.html•http://www.breadfan.com/markov.html•http:...
3937 days ago
Best book Titles for Learning Bionformatics
...can add to our intellect more than reading a book. In books, we...es and other people’s lives. Reading can make us more intelligent, updated, imaginative. Without reading we wouldn’t know any...uman Molecular Genetics, Andrew P. Read, Tom Strachan 1999, BIOS Scie...3908 days ago
- +38 more Top-level pages
Wire posts
News
High Density Sheep SNP Genotyping Chip released!!!
...validated with Illumina GoldenGate Genotyping Assays over 403 animals from 23 breeds. The remaining SNPs were derived from the draft ovine genome. Read more @ http://res.illumina.c...3887 days ago
Illumina reveals first dataset of long reads
...chnology , acquired by Illumina releases new service for long reads sequencing i.e., FastTrack Long Reads. Average read length is aro...You can also check following pages for publications on long reads and more: http://www.illumi...3898 days ago
- +22 more News
Opportunity posts
Project Assistant Position at JMI
...certificate/mark sheet) along with original documents. NoTA/DA will be paid. For any further information you may e-mail to: mihassan@jmLac.in Read more at http://jmi.ac.in/uplo...3514 days ago
Bioinformatician for a lab at the Weizmann Institute of Science, Israel
...biology, biochemistry, immunology, in-vivo models as well as systems biology and bioinformatics to study the biology of PTMs in health and disease. Read more here: http://yifatmerbl....3483 days ago
- +6 more Opportunity posts
ResearchLabs posts
- ...nd structure prediction are the main areas; and protein structure, where the group is working on methods for structure prediction from sequence. To read more about these topics, plea...
3860 days ago
- ...variety of SV discovery approaches including: (i) paired-end mapping (or read pair analysis) based on abnormally mapped pairs of clone ends; (ii) read-depth analysis, which detects...
2983 days ago
- +1 more ResearchLabs posts
Fun
Perl Poem: Parse it in both Perl and English!
...en (please, please); open yourself, wide;join (you, me),connect (us,together), tell me. do something if distressed; @dawn, dance;@evening, sing;read (books,$poems,stories) until...3909 days ago
You can't install David Brownlee ;-)
...sk cpan to install abs, and it return this message. jitendra@jitendra-Aspire-S3-391[parallelLastz] sudo cpan install abs [ 4:43AM]Going to read '/home/jitendra/.cpan/Metadat...1821 days ago
Video
Bioinformatics -- Understanding of living systems through information science
...organisms, DNA contains genetic information, and this is called the genome. But the amount of information involved is huge, so recently, it's been read using next-generation sequenc...3907 days ago
The Story of You: ENCODE and the human genome
...it's used to make different types of cells and different people. The ENCODE project, as it's called, is the latest chapter in the story of you. To read the ENCODE research papers an...3897 days ago
- +2 more Video
Bio-Scripts
Python script to download covid genome !
...mplete": nm = x['accession'] print("downloading", nm) dna = Entrez.efetch(db='nucleotide',id=nm, rettype = 'fasta', retmode= 'text').read().split("\n")[1:] allseq...1126 days ago
R script to visualize fastANI core-genome comparison
...arguments query_fasta=commandArgs(TRUE)[1] subject_fasta=commandArgs(TRUE)[2] fastANI_visual_file=commandArgs(TRUE)[3] library(genoPlotR) #Read fastANI output comparison...1092 days ago
- +59 more Bio-Scripts
Tryst
Tryst with a Bioinformatician # Dr Altan Kara
...the articles with the PMID IDs; PMID: 27378293 and PMID: 26384938 can be read. What's your all-time fa...nd aim? With the increasing amount of data in databases, there is already a massive need for effective...2352 days ago
Tags
How to find a files in a folder or sub folders?
Hi Bioinformaticians, I am new to bioinformatics and Perl. So, please execuse me if I disturb you all with newbie question. I am strugling to find a specific files (cattle_genome.fasta) from a folder and sub folders, and read it. I got some of the help form this website http://s...Tags: Recursively Search, Folders, Sub Folder, Find, Read, Search, Perl.
3913 days ago
- maftools - An R package to summarize, analyze and visualize MAF files. Introduction. With advances in Cancer Genomics, Mutation Annotation Format (MAF) is being widley accepted and used to store variants detected. The Cancer Genome Atlas Project has seqenced over 30 different cancers with sample...
Tags: Bioinformatics, Maf, Tools, MafTools, Paint, Plot, Read
2625 days ago
- +35 more Tags
Comments
Comment on "A quick guide to Phred scaling"
...r representing the quality scores of sequencing reads. It is used to quantify the...y of an error in each base call in a sequencing read. Here is a quick guide to Phr...is a common format used for storing sequencing reads. Each quality score is repre...406 days ago
Comment on "Short-read assembly using Spades !"
...pular software tool for short-read assembly. Here are the genera...ortant to ensure that the raw reads are of high quality and do n...o output_directory -1 forward_reads.fastq -2 reverse_reads.fastq...e the general steps for short-read assembly using SPAdes. Howeve...406 days ago
- +36 more Comments
