List of Bioinformatics Software Tools for Next Generation Sequencing
...rmerly a redistributor of SRA and other NCBI resources; command-line or via web, can...inically relevant information from different resources; two component pipeline: comm...the SCAN database comes directly from public resources, including the HapMap (releas...2899 days ago
2905 days ago
Genome Assembly Tools and Software - PART1 !!
...iety of formats. LightAssembler – Lightweight Resources Assembly Algorithm Lightweight resources assembly algorithm for high-t...es use of third party-tools and High Performance Computing resources. It can be used as a single i...2676 days ago
Bioinformatics Web Application Development with Perl
...e execution model was often slow and cumbersome, and accessing shared resources such as databases was often t...ols, testing systems, and interfaces to document formats and external resources. For example, if you need to...2312 days ago
List of visualization tools for genome alignments
...equencing (NGS) data and the results of analyses within the context of the sequence, and also its six-frame translation http://www.sanger.ac.uk/resources/software/artemis/ DNannotato...2274 days ago
Computational resources for TE discovery and TE detection
Transposable Elements (TEs) to genome structure and evolution as well as their impact on genome sequencing, assembly, annotation and alignment has generated increasing i...2264 days ago
Python learning resources for bioinformatics and computational biologist !
...d productivity tools, games, and desktop apps, so there are plenty of resources to help you learn how to do t...p://bioinformaticsonline.com/discussion/view/459/python-vs-perl More resources at https://github.com/Co...2245 days ago
Some useful Bioinformatics links
...s://www.biostars.org/p/56246/ The MUMmer 3 manual http://mummer.sourceforge.net/manual/#nucmer assembly_olc.pdf http://www.cs.jhu.edu/~langmea/resources/lecture_notes/assembly_olc.pd...2232 days ago
Tools for Protein-Protein Docking !
Predicting the structure of protein–protein complexes using docking approaches is a difficult problem whose major challenges include identifying correct solutions,...2193 days ago
Gap filling or Contigs extensions tools !
...ontent/bcm-hgsc-software), and SCARPA (http://compbio.cs.toronto.edu/hapsembler/scarpa.html). See the PAGIT protocol: http://www.sanger.ac.uk/resources/software/pagit/ In partic...2155 days ago