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...arrow down your search result. This webpage can be an useful resource for a beginners bioinformatician as it contain several bioinformatics basics script that are commonly used by bio...3899 days ago
Download mutliple fasta file from NCBI in one GO!!
...tract/download all fasta sequences in single click given that you already have a list of GIs or accession IDs . Alternatively, use one liner perl script: perl -ne 'if(/^>(\S+)/){...3893 days ago
- Some of the useful bioinformatics scripts. For example ... contig-stats.pl is a Perl script that will automatically describe features of a sequence assembly. http://milkweedgenome.org/?q=scripts
3343 days ago
OPERA : Optimal Paired-End Read Assembler
...caffolding errors. Furthermore, our latest release contains the wrapper script OPERA-long-read that enables...generation sequencing technologies (PacBio or Oxford Nanopore). The manuscript describing the new features a...2778 days ago
- ....Fermi is designed to be used on a multi-core Linux machine with large shared memory. The easiest way to run fermi is to use the run-fermi.pl script. It generates a Makefile...
2778 days ago
- ...e linking the genes CYTH1 and EIF3H. While it has been found in the transcriptome previously, genome sequenc...powerful interactive web tool for viewing complex genomic alignments. Script at https://github.com/Ma...
2736 days ago
- The blog is a collection of script examples with example data and output plots. R produce excellent quality graphs for data analysis, science and business presentation, publications and other purposes. Self-help codes and examples are provided. Enjoy nice graphs !!
2722 days ago
- Useful script for NGS analysis.
2695 days ago
- ...ight Matching able to produce high-quality scaffolds from NGS data (reads and contigs). The tool is written in Python 2.7. It also includes a bash script wrapper that calls aligner in...
2682 days ago
SeqMule: Automated human exome/genome variants detection
SeqMule takes single-end or paird-end FASTQ or BAM files, generates a script consisting of more than 10 popular alignment, analysis tools and runs the script line by line. Users can chang...2599 days ago
