Results for "script"
Top-level pages
...otein sequences. The next step after reading genetic code is writing a script to analyse and explore the hi...programming languages with their packages/libraries, and assist in your scripting work. Navigate the sub-se...3933 days ago
Most Commonly used Awk by Bioinformatician
...f 'stuff | grep | sed | cut...' with a single call to awk. For a simple script, most of the timelag is in lo...or some quick job in the terminal, or build an awk section into a shell script. You can find a lot of online...3897 days ago
Hidden Markov Models, Viterbi Algorithm, Markov Chain Exploration with script
...e interested in exploring Markov Chain Exploration and understand it with graphical version please visit http://www.planet-source-code.com/vb/scripts/ShowCode.asp?txtCodeId=75049...3810 days ago
List of In-silico Binding Site Prediction Tools
...lculating the depth of a residue from the protein surface. A detailed description of the computation of dept...her programs (dpocket & tpocket) that allow you to extract pocket descriptors and test own scoring funct...3729 days ago
Commercial and public next-gen-seq (NGS) software
.../bibiserv.techfak.uni-bielefeld.de/swift/biolib.is library and a set of script targeted to NGS. There are mo...Labs at Stanford. From the 2008 publication Genome-wide analysis of transcription factor binding sites based...3504 days ago
A guide for complete R beginners !
...graphics Save as a png, pdf or svg History What you do can be saved for the next time you use R. Ability to turn it into an automated script to perform again and again on...3346 days ago
- ...is similar in many ways to most other queue systems. You write a batch script then submit it to the queue m...nbsp;SLURMSLURM Example Submit a batch serial job sbatch sbatch runscript.sh Run a script interati...
2899 days ago
- Bash Script source: https://gist.github.com/santhilalsubhash/367befcf5216be4b1fd9 Information: This script converts EnsEMBL GTF (Ex:&nbs...otation table format. It generated two files1) Transcript wise chromosome location with...
2091 days ago
Genome Assembly Tools and Software - PART1 !!
...TransPS 1.1.0 – Transcriptome Post Scaffolding TransP...t-processing of pre-assembled transcriptomes using reference based met...and an independently derived transcriptome assembly. Circlator 1...entifies 3′ UTR Ends of Transcripts in de novo RNA-Seq Assemblie...2671 days ago
Awesome perl frameworks, libraries and software - PART 1
...aHeitor/nipe - Nipe is a script to make Tor Network your defa...gcc - colorgcc is a perl script to colorize gcc output. I'm c.... lhost/sendxmpp - perl-script to send xmpp (jabber), simila...bsp;- Perl Module : Session Description Protocol (rfc2327) songza...2474 days ago
