Results for "sensitive"
Top-level pages
...ers at all sequence positions. Multiple sequence alignments are useful for building sequence profiles or Hidden Markov Models to perform more sensitive homology searches. A sequence...3932 days ago
Commercial and public next-gen-seq (NGS) software
...icted binding sites. MACS also uses a dynamic Poisson distribution to effectively capture local biases in the genome sequence, allowing for more sensitive and robust prediction. Writte...3503 days ago
Software packages for next gen sequence analysis
...icted binding sites. MACS also uses a dynamic Poisson distribution to effectively capture local biases in the genome sequence, allowing for more sensitive and robust prediction. Writte...3227 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...thon, samtoools, pysam API, BLAT, SnpEff Input: BAM Reference Genome: FASTA indexed with SAMtools faidx Output: VCF RVD2 Description: sensitive, variant detection for low-de...2893 days ago
List of visualization tools for genome alignments
...ne/pilelinegui.html SAMtools tview Simple and fast text alignment viewer; NGS compatible http://www.htslib.org/ SEWAL Uses a locality-sensitive hashing algorithm to enumerat...2268 days ago
Some useful Bioinformatics links
...ap Assembly of GEnomes | BMC Bioinformatics | Full Text https://bmcbioinformatics.biomedcentral.com/articles/10.1186/1471-2105-15-302 Fast and sensitive mapping of nanopore sequencin...2226 days ago
Frequent parameters for bioinformatics tools !
...-culling_limit 2 -perc_identity 95 blastp (VF) -culling_limit 2 RGI (ABR) --input_type contig bowtie2 (mapping) --sensitive minimap2 (mapping)...1270 days ago
