Results for "seq"
Blogs
Integrative RNA and ChIP-Seq analysis of regulatory T-cells
Integrative RNA and ChIP-Seq analysis of regulatory T-cells , a Strand NGS applicatio...helper cells. Learn how the gene expression profiles from RNA-Seq and FoxP3 DNA-protein binding sites from ChIP-Seq are integrated. For mor infor...3182 days ago
Calling narrow and broad peaks from ChIP-Seq data
...ks) and enriched regions of histone modification (broad peaks) from ChIP-Seq data.Read the benchmarking study on Calling narrow and broad peaks from ChIP-Seq data in Strand NGS by Rohit G...3182 days ago
Computer simulation of genetic mechanism !!
...ols to generate synthetic next-generation sequencing data by mimicking real sequencing process with empirical...EvolveAGene A realistic coding sequence simulation program that...A program for the simulation of DNA sequence evolution across a phylo...2960 days ago
Live Webinar on RNA-Seq Data Analysis on 9 Nov 2016
Live Webinar on RNA-Seq Data Analysis Abstract: Strand NGS supports an e...orkflow for the analysis and visualization of RNA-Seq data. The workflow includes T...will give an overview of the features in the RNA-Seq data analysis workflow in Str...2740 days ago
Important Journals, Blogs and Forums for Bioinformaticians
...ties. In between lines of code: Lex Nederbragt’s blog on biology, sequencing, bioinformatics, &hell...etagenomics, open science, testing, reproducibility, and programming. Enseqlopedia: James Hadfield’...2628 days ago
BBTools for bioinformatician !
...sp; Code: reformat.sh in=sequences.fasta out=renamed.fasta...gth, you can identify adapter sequences with BBMerge, like this...are set for relatively short sequences so if they are many meg...will forcibly align a primer sequence (or a set of primer sequ...2255 days ago
- ...https://github.com/trinityrnaseq/trinityrnaseq/releases/tag/Trinity-v2.6.6 ➜ cd trinityrnaseq-Trinity-v2.6.6 ➜ trinityr...onRedKmerTable.o obj/analysis/sequenceUtil.o obj/analysis/stack...y '/home/urbe/Tools/trinityrnaseq-Trinity-v2.6.6/Chrysalis' cd...
2118 days ago
Understanding reads mapping and flags !
...sp;An alignment of a read to a single reference sequence that may include in...s are indicative of structural variation in DNA-seq and it may indicate the prese...tions, we can find one alignmnet position which sequence do not have large overla...1822 days ago
Bioinformatics tools for telomere to telomere assembly !
...th k-mer count information from raw, short-read sequencing data to genotype a wid...s) – software designed for processing Iso-Seq data and other long-read tran...ng while detecting polymorphic sites within the sequences and removing potential...977 days ago
