Results for "seqtk"
Blogs
...;& make trinity_essentials make[1]: Entering directory '/home/urbe/Tools/trinityrnaseq-Trinity-v2.6.6/trinity-plugins' tar xvf seqtk-trinity.v0.0.2.tar.gz seqtk-trinity-0.0.2/ seqtk-trinity...2123 days ago
Top-level pages
- ...-c fastx '{print ">"$name"\n"$seq}' input.fastq > output.fasta Seqtk From the same developer, there is another option using a tool called seqtk seqtk seq -a input.fastq >...
2295 days ago
Wire posts
Bio-Scripts
- vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda/label/cf201901 seqtk Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.
1044 days ago
Palindrome Simulation commands !
.../Tools/art_bin_MountRainier/art_illumina -ss MSv3 -sam -i allPalindromeSimulated.fa -p -l 250 -f 100 -m 300 -s 10 -o paired_dat 3321 ~/Tools/seqtk/seqtk mergepe paired_dat1.fq paired...1725 days ago
- +13 more Bio-Scripts
Tags
- There are several ways you can convert fastq to fasta sequences. Some methods are listed below. Using SED sed can be used to selectively print the desired lines from a file, so if you print the first and 2rd line of every 4 lines, you get the sequence header and sequence need...
Tags: fasta, fastq, convert, sed, awk, seqtk, bioawk, fastx, Emboss, fastq2fasta
2295 days ago
