Results for "similarity"
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YASS :: genomic similarity search tool
YASS is a genomic similarity search tool, for nucleic (DNA/RNA) sequences in fasta or plain text form...TERNHUNTER, BLASTZ/LASTZ, LAST ...), YASS uses seeds to detect potential similarity regions, and then tries to ex...2915 days ago
- ...as recipients. The breadth of the database allows not only query sequences, but also their database match partners to be evaluated for sequence similarity or novelty compared to taxono...
2864 days ago
- ...T is a Java application for displaying pairwise comparisons between two or more DNA sequences. It can be used to identify and analyse regions of similarity and difference between genome...
2787 days ago
BLAST Ring Image Generator (BRIG)
...s, post them on one of the trackers on BRIG’s SourceForge page: http://sourceforge.net/tracker/?group_id=328245. Features: Images show similarity between a central reference s...2764 days ago
- ...n also load coordinate files from whole genome aligners such as MUMmer. Therefore, Ribbon can be used to test assembly algorithms or inspect the similarity between species. Supplementar...
2743 days ago
- ...hem on one of the trackers on BRIG’s SourceForge page:http://sourceforge.net/tracker/?group_id=328245. Features: Images show similarity between a central reference s...
2624 days ago
LoRDEC: a hybrid error correction program for long, PacBio reads
...C can correct errors of all these types. After correction, a larger portion of the sequence of PacBio reads is usable for detection of region of similarity with other sequences, for ali...2572 days ago
MOSS: A System for Detecting Software Similarity
Moss (for a Measure Of Software Similarity) is an automatic system for determining the similarity of programs. To date, the main application of Moss has been in detecting plagiarism in programming classes. Since...2329 days ago
PLAST: A fast, accurate and NGS scalable bank-to-bank sequence similarity search tool
PLAST is a fast, accurate and NGS scalable bank-to-bank sequence similarity search tool providing significant accelerations of seeds-based heuristic comparison methods, such as the Blas...2337 days ago
- ...ent identity is above a specified threshold. It does not compute the alignments explicitly, but rather estimates a k-mer based Jaccard similarity using a combination of&n...
2325 days ago
